RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 POLR2LP62875 67 aaKnown RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ZRANB3Q5FWF4 1079 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 LRRC66Q68CR7 880 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF470Q6ECI4 717 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ANO7Q6IWH7 933 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 FAM151BQ6UXP7 276 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PARS2Q7L3T8 475 aaKnown RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 GJD3Q8N144 294 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 BRSK1Q8TDC3 778 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PIH1D2Q8WWB5 315 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 CERS2Q96G23 380 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 CYTH2Q99418 400 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 TXLNGYQ9BZA5 131 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 LMAN1LQ9HAT1 526 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 GGT7Q9UJ14 662 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 SOX13Q9UN79 622 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 DUSP12Q9UNI6 340 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 FAM170BA6NMN3 283 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 C1QTNF3-AMACRE9PGA6 284 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 EPOP01588 193 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PRSS56P0CW18 603 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 HPDP32754 393 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 STX2P32856 288 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 SATB1Q01826 763 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF844Q08AG5 666 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 GPS2Q13227 327 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 BMPR2Q13873 1038 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF805Q5CZA5 627 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 TAS2R42Q7RTR8 314 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 DENND6AQ8IWF6 608 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 GDAP1Q8TB36 358 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PAFAH2Q99487 392 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 MYOCQ99972 504 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 NAT9Q9BTE0 207 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PCDH12Q9NPG4 1184 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 FKBPLQ9UIM3 349 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 COQ6Q9Y2Z9 468 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF711Q9Y462 761 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 GOLGA8RI6L899 631 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 RGS16O15492 202 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 IVLP07476 585 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 ALADP13716 330 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PMLP29590 882 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 GRIA4P48058 902 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 LRRC6Q86X45 466 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 HDDC3Q8N4P3 179 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 PPP1R16AQ96I34 528 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 KLF6Q99612 283 aaPredicted RBP9.37□□□□□ -0.91
SDCBP-212ENST00000523483 DNAH14Q0VDD8 3507 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 WDFY4Q6ZS81 3184 aa9.37□□□□□ -0.91
SDCBP-212ENST00000523483 TCRBV21S2A2A0A5A6 115 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 UBA6A0AVT1 1052 aaPredicted RBP9.36□□□□□ -0.91
SDCBP-212ENST00000523483 KRBA1A5PL33 1030 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 DNTTP04053 509 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ACADMP11310 421 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 LPOP22079 712 aaPredicted RBP9.36□□□□□ -0.91
SDCBP-212ENST00000523483 TARSP26639 723 aaKnown RBP9.36□□□□□ -0.91
SDCBP-212ENST00000523483 TNFRSF4P43489 277 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ACOX1Q15067 660 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 TSTD2Q5T7W7 516 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 MROH9Q5TGP6 573 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ERAP2Q6P179 960 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 RFLNAQ6ZTI6 216 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 IQCKQ8N0W5 287 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 MREGQ8N565 214 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 KLK6Q92876 244 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ZNF641Q96N77 438 aaPredicted RBP9.36□□□□□ -0.91
SDCBP-212ENST00000523483 TUBGCP5Q96RT8 1024 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 CD320Q9NPF0 282 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 DENND4AQ7Z401 1863 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 FAM237BA0A1B0GVD1 139 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 MAGEB16A2A368 324 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 LDB2O43679 373 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ADAM23O75077 832 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ELFN1P0C7U0 828 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 MAT2AP31153 395 aaKnown RBP9.36□□□□□ -0.91
SDCBP-212ENST00000523483 CNTN1Q12860 1018 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 GRM3Q14832 879 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 CST6Q15828 149 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 RALGPS1Q5JS13 557 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 SPANXN3Q5MJ09 141 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 BRAT1Q6PJG6 821 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 OR14C36Q8NHC7 312 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ARRDC3Q96B67 414 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 CPEB1Q9BZB8 566 aaKnown RBP9.36□□□□□ -0.91
SDCBP-212ENST00000523483 OSBPL6Q9BZF3 934 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 ARNT2Q9HBZ2 717 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 FBXL12Q9NXK8 326 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 RABGEF1Q9UJ41 708 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 PHTF1Q9UMS5 762 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 PSAT1Q9Y617 370 aa9.36□□□□□ -0.91
SDCBP-212ENST00000523483 UPK3BL1B0FP48 263 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 UPK3BL2E5RIL1 263 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 HTRA2O43464 458 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 LZTS3O60299 673 aaPredicted RBP9.35□□□□□ -0.91
SDCBP-212ENST00000523483 USP1O94782 785 aa9.35□□□□□ -0.91
SDCBP-212ENST00000523483 DCNP07585 359 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms