RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 RAD1O60671 282 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 LRIG2O94898 1065 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 PCCBP05166 539 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 CCNB1P14635 433 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 PON1P27169 355 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 CD1CP29017 333 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ALDH4A1P30038 563 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 STAT1P42224 750 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 LIG3P49916 1009 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 OR1D5P58170 312 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 RHOAP61586 193 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 APBA1Q02410 837 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 PAK1Q13153 545 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 AMZ1Q400G9 498 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 CRTC2Q53ET0 693 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 FAM72AQ5TYM5 149 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 FAM72DQ6L9T8 149 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ERAP2Q6P179 960 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 BRAT1Q6PJG6 821 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 LEKR1Q6ZMV7 388 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ATCAYQ86WG3 371 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 FAM72BQ86X60 149 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 FAM71AQ8IYT1 594 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 PLA2G15Q8NCC3 412 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 AGBL5Q8NDL9 886 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 OR4D9Q8NGE8 314 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 CCL4L1Q8NHW4 92 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ART4Q93070 314 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 TBC1D31Q96DN5 1066 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ABHD17AQ96GS6 310 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 CCDC74BQ96LY2 380 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ZNF641Q96N77 438 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 DPYSL5Q9BPU6 564 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 EFHD1Q9BUP0 239 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 SUV39H2Q9H5I1 410 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 MRPL40Q9NQ50 206 aaKnown RBP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 ZNF71Q9NQZ8 489 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 LHX3Q9UBR4 397 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 AJAP1Q9UKB5 411 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-211ENST00000508546 DAAM1Q9Y4D1 1078 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 NAV3Q8IVL0 2385 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 SHANK1Q9Y566 2161 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 CSMD2Q7Z408 3487 aa9.43□□□□□ -0.9
NEDD9-211ENST00000508546 PRSS38A1L453 326 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 RHPN2P1A8MT19 583 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 B4E171 279 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 PDE2AO00408 941 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 INSIG1O15503 277 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 NKX2-8O15522 239 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 PIGNO95427 931 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 THRAP10827 490 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 CSTF2P33240 577 aaKnown RBP eCLIP9.42□□□□□ -0.92e-7■■■■□ 23.8
NEDD9-211ENST00000508546 TSPAN7P41732 249 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 MAZP56270 477 aaKnown RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 STX17P56962 302 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 YBEYP58557 167 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 RAB15P59190 212 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 ATP11AP98196 1134 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 CDC20Q12834 499 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 KLRB1Q12918 225 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 LACTB2Q53H82 288 aaPredicted RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 DNAAF5Q86Y56 855 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 MSANTD4Q8NCY6 345 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 ZDHHC1Q8WTX9 485 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 TEFMQ96QE5 360 aaKnown RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 NCAPGQ9BPX3 1015 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 SPRY4Q9C004 299 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 PDCL3Q9H2J4 239 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 NOL6Q9H6R4 1146 aaKnown RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 CYP4F12Q9HCS2 524 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 SIX2Q9NPC8 291 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 SPATS2LQ9NUQ6 558 aaKnown RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 SLC39A1Q9NY26 324 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 DNAJC12Q9UKB3 198 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 PILRAQ9UKJ1 303 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 ATP8A1Q9Y2Q0 1164 aa9.42□□□□□ -0.9
NEDD9-211ENST00000508546 ZNF106Q9H2Y7 1883 aaKnown RBP9.42□□□□□ -0.9
NEDD9-211ENST00000508546 SPG11Q96JI7 2443 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 AKAP9Q99996 3911 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 PRRC2CQ9Y520 2896 aaKnown RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 IGHV1OR21-1A0A087WYE8 117 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 GOLGA6L4A6NEF3 574 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 GOLGA8SH3BPF8 625 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 SEMA7AO75326 666 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 RECQL5O94762 991 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 LSM8O95777 96 aaKnown RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 FGF1P05230 155 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 PLEKP08567 350 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 KRT7P08729 469 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 PNMA6AP0CW24 399 aaPredicted RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 MAP4P27816 1152 aaKnown RBP9.41□□□□□ -0.9
NEDD9-211ENST00000508546 MC1RQ01726 317 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 ABHD18Q0P651 414 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 RALGDSQ12967 914 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 CYTH1Q15438 398 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 RAB6CQ53S08 254 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 C2CD6Q53TS8 623 aa9.41□□□□□ -0.9
NEDD9-211ENST00000508546 DCAF12Q5T6F0 453 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms