RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 KIAA1468Q9P260 1216 aa13.07□□□□□ -0.32
TRIO-205ENST00000503399 ARHGEF17Q96PE2 2063 aaPredicted RBP13.06□□□□□ -0.32
TRIO-205ENST00000503399 IGHV5-10-1A0A0J9YXX1 117 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 A8MX80 341 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 TNFRSF10CO14798 259 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 ZW10O43264 779 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 GFPT2O94808 682 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 NTRK1P04629 796 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 KRT3P12035 628 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 LIFP15018 202 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 GPD1P21695 349 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 MMP8P22894 467 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 SERPINA4P29622 427 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 CCR10P46092 362 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
TRIO-205ENST00000503399 RALGDSQ12967 914 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 ACOX1Q15067 660 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 IGFBP7Q16270 282 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
TRIO-205ENST00000503399 MIIPQ5JXC2 388 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 CCDC112Q8NEF3 446 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 CENPIQ92674 756 aaPredicted RBP13.06□□□□□ -0.32
TRIO-205ENST00000503399 ART4Q93070 314 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 TUBGCP5Q96RT8 1024 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 SELENOOQ9BVL4 669 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 NAA15Q9BXJ9 866 aaKnown RBP13.06□□□□□ -0.32
TRIO-205ENST00000503399 ATP13A3Q9H7F0 1226 aa13.06□□□□□ -0.32
TRIO-205ENST00000503399 SPATS2LQ9NUQ6 558 aaKnown RBP13.06□□□□□ -0.32
TRIO-205ENST00000503399 J3KR12 359 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 HGSO14964 777 aaPredicted RBP13.05□□□□□ -0.32
TRIO-205ENST00000503399 ECEL1O95672 775 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 FGF3P11487 239 aaPredicted RBP13.05□□□□□ -0.32
TRIO-205ENST00000503399 CCNB1P14635 433 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 MPSTP25325 297 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 RFC1P35251 1148 aaPredicted RBP13.05□□□□□ -0.32
TRIO-205ENST00000503399 UGT1A3P35503 534 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 RGRP47804 291 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 ARSDP51689 593 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 FMO1Q01740 532 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 CDR2Q01850 454 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 ILF3Q12906 894 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRIO-205ENST00000503399 SLC30A9Q6PML9 568 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 LIPIQ6XZB0 460 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 SRLQ86TD4 932 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 FAM129CQ86XR2 697 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 ZNF677Q86XU0 584 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 PELI3Q8N2H9 469 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 CELF6Q96J87 481 aaKnown RBP13.05□□□□□ -0.32
TRIO-205ENST00000503399 GSDMCQ9BYG8 508 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 STK33Q9BYT3 514 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 B3GNT4Q9C0J1 378 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 PDFQ9HBH1 243 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
TRIO-205ENST00000503399 NOCTQ9UK39 431 aaKnown RBP13.05□□□□□ -0.32
TRIO-205ENST00000503399 B3GALT1Q9Y5Z6 326 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 FLNCQ14315 2725 aa13.05□□□□□ -0.32
TRIO-205ENST00000503399 CFAP69A5D8W1 941 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 GOLGA6CA6NDK9 693 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 ZNF891A8MT65 544 aaPredicted RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 PDE2AO00408 941 aaPredicted RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 CCP110O43303 1012 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 RAD1O60671 282 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 PALMO75781 387 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 CYP1A1P04798 512 aaPredicted RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 FGF1P05230 155 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 GOLGA6DP0CG33 693 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 PRKAR1AP10644 381 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 MYCLP1P12525 358 aaPredicted RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 AK4P27144 223 aaPredicted RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 CSTF2P33240 577 aaKnown RBP eCLIP13.04□□□□□ -0.32
TRIO-205ENST00000503399 STAT1P42224 750 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 NSFP46459 744 aaKnown RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 GNPDA1P46926 289 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 TPI1P60174 286 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 BCL2L1Q07817 233 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 NKAIN2Q5VXU1 208 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 DENND2CQ68D51 928 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 PNCKQ6P2M8 343 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 WDR59Q6PJI9 974 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 NRSN1Q8IZ57 195 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 UMODL1-AS1Q8N2C9 162 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 MLKLQ8NB16 471 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 TSEN2Q8NCE0 465 aaKnown RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 AGBL5Q8NDL9 886 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 GPBAR1Q8TDU6 330 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 NUS1Q96E22 293 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 CINPQ9BW66 212 aaPredicted RBP13.04□□□□□ -0.32
TRIO-205ENST00000503399 SLC39A1Q9NY26 324 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 GOLGA6AQ9NYA3 693 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 ADAM22Q9P0K1 906 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 TAAR2Q9P1P5 351 aa13.04□□□□□ -0.32
TRIO-205ENST00000503399 WASH4PA8MWX3 477 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 FGF10O15520 208 aaPredicted RBP13.03□□□□□ -0.32
TRIO-205ENST00000503399 PRAMEF11O60813 436 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 HOXC4P09017 264 aaPredicted RBP13.03□□□□□ -0.32
TRIO-205ENST00000503399 GP1BBP13224 206 aa13.03□□□□□ -0.32
TRIO-205ENST00000503399 CHRNB2P17787 502 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms