RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 RASSF2P50749 326 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 GAS1P54826 345 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 NAP1L1P55209 391 aaKnown RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 P2RX3P56373 397 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SELENOVP59797 346 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 PPATQ06203 517 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM27E3Q08E93 113 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 GOLGA8DPQ0D2H9 430 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 FGFBP1Q14512 234 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 DUSP6Q16828 381 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SOWAHAQ2M3V2 549 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TCTN1Q2MV58 587 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 COL28A1Q2UY09 1125 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 DPCR1Q3MIW9 517 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 ODF3L2Q3SX64 289 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 ESCO2Q56NI9 601 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 DCAF12L2Q5VW00 463 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TTI2Q6NXR4 508 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TSSK4Q6SA08 328 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 CYP20A1Q6UW02 462 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 Q6ZTK2 550 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 GSTA5Q7RTV2 222 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 MB21D2Q8IYB1 491 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 PARP16Q8N5Y8 322 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 FRMD1Q8N878 549 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TEX45Q8NA69 505 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TMEM116Q8NCL8 245 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 C7orf57Q8NEG2 295 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 GPT2Q8TD30 523 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 WFIKKN2Q8TEU8 576 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 PSPC1Q8WXF1 523 aaKnown RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 USP6NLQ92738 828 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM149B1Q96BN6 582 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TIGD1Q96MW7 591 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 WDFY2Q96P53 400 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 TREX2Q9BQ50 279 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SDF4Q9BRK5 362 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 MUC13Q9H3R2 512 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 PLEKHA4Q9H4M7 779 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 KIF9Q9HAQ2 790 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SCPEP1Q9HB40 452 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 FBRSL1Q9HCM7 1045 aaKnown RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 BPIFA1Q9NP55 256 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SMYD2Q9NRG4 433 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SLC6A13Q9NSD5 602 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 SEPT11Q9NVA2 429 aaKnown RBP2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 ANKRD10Q9NXR5 420 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 EHD2Q9NZN4 543 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 POLG2Q9UHN1 485 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 A3GALT2U3KPV4 340 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 RUSC2Q8N2Y8 1516 aa2.52□□□□□ -2.01
HMGB1P35-201ENST00000503360 A0A0U1RQF3 1178 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 LIPT2A6NK58 231 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 KDM4EB2RXH2 506 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 I6L893 689 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 LDB2O43679 373 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 KLK8O60259 260 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 PAGE4O60829 102 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MTA2O94776 668 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 GFPT2O94808 682 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CYP1A2P05177 515 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 EIF2S1P05198 315 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 RARGP13631 454 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ARSBP15848 533 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 AGAP20933 346 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CDC25AP30304 524 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CDAP32320 146 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 SHMT1P34896 483 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 PPARGP37231 505 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 THPOP40225 353 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MLH1P40692 756 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 PIP4K2AP48426 406 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ENTPD1P49961 510 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CLNS1AP54105 237 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 DRG2P55039 364 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CEBPZQ03701 1054 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 EGR4Q05215 589 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CSTF3Q12996 717 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 GPR18Q14330 331 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ALG11Q2TAA5 492 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZNF284Q2VY69 593 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 FAM205BPQ63HN1 556 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CFAP161Q6P656 301 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 NCEH1Q6PIU2 408 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 FBXO46Q6PJ61 603 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 LCTLQ6UWM7 567 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CCDC129Q6ZRS4 1044 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 Q6ZSV7 163 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 TRILQ7L0X0 811 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MON1BQ7L1V2 547 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ZNF367Q7RTV3 350 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 PATL1Q86TB9 770 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 MIGA1Q8NAN2 632 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 NEK9Q8TD19 979 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 CREB3L4Q8TEY5 395 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 SNAPC3Q92966 411 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 ARHGEF2Q92974 986 aaKnown RBP2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 OTULINQ96BN8 352 aa2.51□□□□□ -2.01
HMGB1P35-201ENST00000503360 FBXL8Q96CD0 374 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms