RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 SPATA19Q7Z5L4 167 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 MIB1Q86YT6 1006 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 PGAM4Q8N0Y7 254 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 FBXW8Q8N3Y1 598 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 HASPINQ8TF76 798 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 HEXDCQ8WVB3 486 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ZNF333Q96JL9 665 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 SEMA3CQ99985 751 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 HOPXQ9BPY8 73 aaPredicted RBP7.43□□□□□ -1.22
PDGFC-203ENST00000502773 CEP41Q9BYV8 373 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 ATP13A1Q9HD20 1204 aa7.43□□□□□ -1.22
PDGFC-203ENST00000502773 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 MYADML2A6NDP7 307 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 F5H423 210 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FAM72CH0Y354 149 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 QSOX1O00391 747 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 PRRG1O14668 218 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 KPNA5O15131 536 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 DNAJA2O60884 412 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 SRP72O76094 671 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 C1QAP02745 245 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 HLA-DQB2P05538 268 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 HSPA1AP0DMV8 641 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 HSPA1BP0DMV9 641 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 IMPDH1P20839 514 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 NNMTP40261 264 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 NAGLUP54802 743 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 SAMD4BQ5PRF9 694 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FAM72AQ5TYM5 149 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 HECTD2Q5U5R9 776 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 RAP1GAP2Q684P5 730 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 CCSAPQ6IQ19 270 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FAM72DQ6L9T8 149 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 OTOP3Q7RTS5 596 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 GPRIN1Q7Z2K8 1008 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FAM72BQ86X60 149 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ARHGAP12Q8IWW6 846 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 GOLM1Q8NBJ4 401 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 OMA1Q96E52 524 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 APOL2Q9BQE5 337 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 RTP3Q9BQQ7 232 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 RHOBTB2Q9BYZ6 727 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FAM192AQ9GZU8 254 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 KCNK13Q9HB14 408 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ABHD14A-ACY1A0A1B0GW23 586 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 MTMR11A4FU01 709 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 DPPA5A6NC42 116 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 CAPN14A8MX76 684 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 HCRTO43612 131 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ETS2P15036 469 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ITGALP20701 1170 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 MED21Q13503 144 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 CSHL1Q14406 222 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 DDR2Q16832 855 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 C5orf22Q49AR2 442 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 KIAA0319Q5VV43 1072 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FRA10AC1Q70Z53 315 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 SCD5Q86SK9 330 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 OR56A4Q8NGH8 313 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 SCAMP5Q8TAC9 235 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ROPN1LQ96C74 230 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 TRMT2BQ96GJ1 504 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ATXN7L3BQ96GX2 97 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ZNF184Q99676 751 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 POMKQ9H5K3 350 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 NMRK2Q9NPI5 230 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ANLNQ9NQW6 1124 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 TREX1Q9NSU2 369 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 TRMT13Q9NUP7 481 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 DDX18Q9NVP1 670 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 XPR1Q9UBH6 696 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 GABRQQ9UN88 632 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 H0Y626 953 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 INSIG1O15503 277 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 PEX1O43933 1283 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 NAT2P11245 290 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 CLCN4P51793 760 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 TRAP1Q12931 704 aaKnown RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 RAB6CQ53S08 254 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 PLEKHG4Q58EX7 1191 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ADGRF1Q5T601 910 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 RNF220Q5VTB9 566 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FBXL22Q6P050 247 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 CNKSR3Q6P9H4 555 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 CES3Q6UWW8 571 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 GALNT13Q8IUC8 556 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 SLC41A1Q8IVJ1 513 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FSTL5Q8N475 847 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 DTX3LQ8TDB6 740 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 SLC26A7Q8TE54 656 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 ACDQ96AP0 544 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 HMCESQ96FZ2 354 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 FCRL3Q96P31 734 aaPredicted RBP7.42□□□□□ -1.22
PDGFC-203ENST00000502773 BTBD9Q96Q07 612 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 PSKH2Q96QS6 385 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 MECRQ9BV79 373 aa7.42□□□□□ -1.22
PDGFC-203ENST00000502773 KLHL4Q9C0H6 718 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms