RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 TBC1D3HP0C7X1 549 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 PXNP49023 591 aaPredicted RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 CCR5P51681 352 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 PLTPP55058 493 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TAS2R38P59533 333 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 CBLBQ13191 982 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 ANGPT1Q15389 498 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TAF1AQ15573 450 aaPredicted RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 SPDYCQ5MJ68 293 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 ZDHHC20Q5W0Z9 365 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TBC1D3GQ6DHY5 549 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TBC1D3CQ6IPX1 549 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TSSK4Q6SA08 328 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 CRTC1Q6UUV9 634 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 NLRP9Q7RTR0 991 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TRIM69Q86WT6 500 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 TBC1D3Q8IZP1 549 aaPredicted RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 ZCCHC9Q8N567 271 aaKnown RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 EIF1ADQ8N9N8 165 aaKnown RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 CADM4Q8NFZ8 388 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 BLOC1S5Q8TDH9 187 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 ASB12Q8WXK4 309 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 ART4Q93070 314 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 LRRC39Q96DD0 335 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 SERPINB12Q96P63 405 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 RANBP9Q96S59 729 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 C1QTNF7Q9BXJ2 289 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 GPR63Q9BZJ6 419 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 CDH19Q9H159 772 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 GDF3Q9NR23 364 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 GRHL1Q9NZI5 618 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 MTRF1LQ9UGC7 380 aaKnown RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 DMGDHQ9UI17 866 aaKnown RBP11.58□□□□□ -0.56
LSM2-214ENST00000493387 RIMKLBQ9ULI2 386 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 ZNF711Q9Y462 761 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 PCDHGA2Q9Y5H1 932 aa11.58□□□□□ -0.56
LSM2-214ENST00000493387 NPIPB15A6NHN6 443 aaPredicted RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 GOLGA8MH3BSY2 632 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 EIF3HO15372 352 aaKnown RBP eCLIP11.57□□□□□ -0.56
LSM2-214ENST00000493387 LZTS3O60299 673 aaPredicted RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 RNGTTO60942 597 aaKnown RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 TM7SF2O76062 418 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PRKCGP05129 697 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 TUBBP07437 444 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 ALPIP09923 528 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 SP9P0CG40 484 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 TPH1P17752 444 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 LPOP22079 712 aaPredicted RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 ADRA1DP25100 572 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 MCM3P25205 808 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 ACSL1P33121 698 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 GRIA1P42261 906 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 MAGEA3P43357 314 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 STC1P52823 247 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PTPN5P54829 565 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 SESN2P58004 480 aaPredicted RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 CREB5Q02930 508 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 DMWDQ09019 674 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 RALGDSQ12967 914 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 SGCGQ13326 291 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 MSLNQ13421 630 aaPredicted RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 OLIG2Q13516 323 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 HIF1AQ16665 826 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 CDKN3Q16667 212 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 KCTD19Q17RG1 926 aaPredicted RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 LRRC73Q5JTD7 316 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PCID2Q5JVF3 399 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 LRRC66Q68CR7 880 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 KIAA0895LQ68EN5 471 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 LIPIQ6XZB0 460 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 ZNF534Q76KX8 674 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 GLT6D1Q7Z4J2 308 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 TMC3Q7Z5M5 1100 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 CAND1Q86VP6 1230 aaKnown RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 HORMAD1Q86X24 394 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 CCNJLQ8IV13 435 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 NRSN1Q8IZ57 195 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 LRRN4CLQ8ND94 238 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PPHLN1Q8NEY8 458 aaKnown RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 GAB3Q8WWW8 586 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 RLN3Q8WXF3 142 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 FOXJ1Q92949 421 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PEX13Q92968 403 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 NAT9Q9BTE0 207 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 LRFN3Q9BTN0 628 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PHACTR1Q9C0D0 580 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 IRF2BPLQ9H1B7 796 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 MRM3Q9HC36 420 aaKnown RBP11.57□□□□□ -0.56
LSM2-214ENST00000493387 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.57□□□□□ -0.56
LSM2-214ENST00000493387 PKD2L2Q9NZM6 624 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 SAMD15Q9P1V8 674 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 PKP3Q9Y446 797 aa11.57□□□□□ -0.56
LSM2-214ENST00000493387 A0A1W2PQU0 124 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 ESYT3A0FGR9 886 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 FAM47DPA6NHR8 397 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 DLL1O00548 723 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 STX7O15400 261 aaKnown RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 SPINT1O43278 529 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms