RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 EURLQ9NYK6 297 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 THAP10Q9P2Z0 257 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 CTNNAL1Q9UBT7 734 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 TBK1Q9UHD2 729 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 LGALS13Q9UHV8 139 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 SPO11Q9Y5K1 396 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
PDZRN3-210ENST00000492909 A0A0J9YYE9 177 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 CXorf49A8MYA2 514 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 TRBC1P01850 177 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 TNFRSF4P43489 277 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 NAB1Q13506 487 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 TAF1AQ15573 450 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 TNFAIP8L3Q5GJ75 292 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 KIAA0930Q6ICG6 404 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 ADGRD1Q6QNK2 874 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC26A11Q86WA9 606 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 RASSF3Q86WH2 238 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 NDUFAF2Q8N183 169 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 MDGA1Q8NFP4 955 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 SPOCK2Q92563 424 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 SRPK1Q96SB4 655 aaKnown RBP14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 OSBPL1AQ9BXW6 950 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 C8orf33Q9H7E9 229 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 MAGEE1Q9HCI5 957 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 IL1RAPL1Q9NZN1 696 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC2A6Q9UGQ3 507 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 IL36AQ9UHA7 158 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 RIMKLBQ9ULI2 386 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 STARD13Q9Y3M8 1113 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 WASF2Q9Y6W5 498 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 PIAS3Q9Y6X2 628 aa14.13□□□□□ -0.15
PDZRN3-210ENST00000492909 F5P12259 2224 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 C2orf81A6NN90 581 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 LEFTY1O75610 366 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 VAPBO95292 243 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 HLA-EP13747 358 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 DRD4P21917 467 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 ATP5DP30049 168 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 ABL2P42684 1182 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 PDE1BQ01064 536 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 PFKPQ01813 784 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 SMAD1Q15797 465 aaKnown RBP14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 EGFLAMQ63HQ2 1017 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 BRAT1Q6PJG6 821 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 TXNDC11Q6PKC3 985 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 MARK2Q7KZI7 788 aaKnown RBP14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 ZSWIM9Q86XI8 627 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 OR13J1Q8NGT2 312 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 STYXQ8WUJ0 223 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 DCAKDQ8WVC6 231 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 SEC16BQ96JE7 1060 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 KLHL32Q96NJ5 620 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 SMIM14Q96QK8 99 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 TRABDQ9H4I3 376 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 HEBP1Q9NRV9 189 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 PHTF1Q9UMS5 762 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 KCTD3Q9Y597 815 aa14.12□□□□□ -0.15
PDZRN3-210ENST00000492909 AURKAO14965 403 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 NPC1O15118 1278 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 HNRNPLP14866 589 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CHN1P15882 459 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CTPS1P17812 591 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 LPOP22079 712 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 IL12RB1P42701 662 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ARCN1P48444 511 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 POLR2LP62875 67 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ACVR1Q04771 509 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 IFT88Q13099 833 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ELAVL3Q14576 367 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 TMED2Q15363 201 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 HSP90AA5PQ58FG0 334 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ARSIQ5FYB1 569 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 C9orf64Q5T6V5 341 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 RNF187Q5TA31 235 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CNPY4Q8N129 248 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF513Q8N8E2 541 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 MDM1Q8TC05 714 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 OR8D1Q8WZ84 308 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 TXNDC16Q9P2K2 825 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 SUN2Q9UH99 717 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF180Q9UJW8 692 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 HCN2Q9UL51 889 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF711Q9Y462 761 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CAPN7Q9Y6W3 813 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ATG2BQ96BY7 2078 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CAPN8A6NHC0 703 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 K7EQS6 105 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 BUD23O43709 281 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 SIN3BO75182 1162 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC4A1P02730 911 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 PRNPP04156 253 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 EPHX1P07099 455 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CTSLP07711 333 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ALPIP09923 528 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ARNTP27540 789 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF140P52738 457 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 PRAMEP78395 509 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 PPARDQ03181 441 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 USP45Q70EL2 814 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms