RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 HMCESQ96FZ2 354 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 ZNF641Q96N77 438 aaPredicted RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 TAAR9Q96RI9 348 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 DDA1Q9BW61 102 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 SUV39H2Q9H5I1 410 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 PCDH12Q9NPG4 1184 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 RWDD2AQ9UIY3 292 aa8.24□□□□□ -1.09
USP39-216ENST00000490193 TEP1Q99973 2627 aaKnown RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 SPTAN1Q13813 2472 aaKnown RBP8.24□□□□□ -1.09
USP39-216ENST00000490193 IGHV5-10-1A0A0J9YXX1 117 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 WASH4PA8MWX3 477 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 B4DGG1 531 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 CACNB4O00305 520 aaPredicted RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 CAPN5O15484 640 aaPredicted RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 INSIG1O15503 277 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 B4GAT1O43505 415 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PIGNO95427 931 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PCCBP05166 539 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PLEKP08567 350 aaPredicted RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 FGF3P11487 239 aaPredicted RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 LIFP15018 202 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 UGT1A3P35503 534 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 STAT1P42224 750 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 GPR3P46089 330 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 CCR10P46092 362 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 LIG3P49916 1009 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 ATP11AP98196 1134 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 SKIDA1Q1XH10 827 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PARP15Q460N3 678 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 CCDC14Q49A88 953 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 RAB6CQ53S08 254 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 C2CD6Q53TS8 623 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 SWT1Q5T5J6 900 aaKnown RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 ERAP2Q6P179 960 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PTRH1Q86Y79 214 aaKnown RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 EMC1Q8N766 993 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 RTL3Q8N8U3 475 aaKnown RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 SLC45A3Q96JT2 553 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PSMG3-AS1Q96PY0 264 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 TUBGCP5Q96RT8 1024 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 NUDT22Q9BRQ3 303 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 KLC2Q9H0B6 622 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 RAB6CQ9H0N0 254 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 TMEM168Q9H0V1 697 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PDCL3Q9H2J4 239 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 DPEP2Q9H4A9 486 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 RDH14Q9HBH5 336 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 METTL5Q9NRN9 209 aaKnown RBP8.23□□□□□ -1.09
USP39-216ENST00000490193 MAN2B2Q9Y2E5 1009 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 ATP8A1Q9Y2Q0 1164 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 DAAM1Q9Y4D1 1078 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 MYO9AB2RTY4 2548 aa8.23□□□□□ -1.09
USP39-216ENST00000490193 PRSS38A1L453 326 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 C2CD4BA6NLJ0 364 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 ZNF891A8MT65 544 aaPredicted RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 BIN1O00499 593 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 ZW10O43264 779 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 RECQL5O94762 991 aaPredicted RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 CCNB1P14635 433 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 GM2AP17900 193 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 MMP8P22894 467 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CD1CP29017 333 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 SDC4P31431 198 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CSNK1DP48730 415 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 LIMK2P53671 638 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 HDAC4P56524 1084 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 GSCP56915 257 aaPredicted RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 OR1D5P58170 312 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 RALGDSQ12967 914 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CYTH1Q15438 398 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CDO1Q16878 200 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 C15orf59Q2T9L4 293 aaPredicted RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 CRTC2Q53ET0 693 aaPredicted RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 AFMIDQ63HM1 303 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 LIPIQ6XZB0 460 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 NOP9Q86U38 636 aaKnown RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 ZSWIM9Q86XI8 627 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 ZNF677Q86XU0 584 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 NRROSQ86YC3 692 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 UMODL1-AS1Q8N2C9 162 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 FAM26EQ8N5C1 309 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 IL22RA1Q8N6P7 574 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CCDC185Q8N715 623 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 AGBL5Q8NDL9 886 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CCDC112Q8NEF3 446 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 OR4D9Q8NGE8 314 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CCL4L1Q8NHW4 92 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 EPS8L1Q8TE68 723 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 RXFP2Q8WXD0 754 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 JPH3Q8WXH2 748 aaPredicted RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 PMEPA1Q969W9 287 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 ECHDC3Q96DC8 303 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 EXOC2Q96KP1 924 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 CCDC74BQ96LY2 380 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 DPYSL5Q9BPU6 564 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 NCAPGQ9BPX3 1015 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 NAA15Q9BXJ9 866 aaKnown RBP8.22□□□□□ -1.09
USP39-216ENST00000490193 MAGEB5Q9BZ81 275 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 ASPSCR1Q9BZE9 553 aa8.22□□□□□ -1.09
USP39-216ENST00000490193 SPRY4Q9C004 299 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms