RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 CLCNKBP51801 687 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 CDH15P55291 814 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 ARF3P61204 181 aaPredicted RBP3.91□□□□□ -1.78
GTF3A-207ENST00000482655 ARF1P84077 181 aaKnown RBP3.91□□□□□ -1.78
GTF3A-207ENST00000482655 Q0VFX4 171 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 TRAF2Q12933 501 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 PRKG2Q13237 762 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 IZUMO4Q1ZYL8 232 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 FAM69AQ5T7M9 428 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 TNS3Q68CZ2 1445 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 HAUS3Q68CZ6 603 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 MTFR2Q6P444 385 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 ATF7IPQ6VMQ6 1270 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 CPLX4Q7Z7G2 160 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 CHD1LQ86WJ1 897 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 SCN4BQ8IWT1 228 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 VPS8Q8N3P4 1428 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 NFKBIDQ8NI38 313 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 SLC35F5Q8WV83 523 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 FAR1Q8WVX9 515 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 FRG2BQ96QU4 278 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 NPLQ9BXD5 320 aaPredicted RBP3.91□□□□□ -1.78
GTF3A-207ENST00000482655 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.91□□□□□ -1.78
GTF3A-207ENST00000482655 MROH8Q9H579 483 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 BEX4Q9NWD9 120 aaPredicted RBP3.91□□□□□ -1.78
GTF3A-207ENST00000482655 KLQ9UEF7 1012 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 CD207Q9UJ71 328 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 OSGIN2Q9Y236 505 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 RABGAP1Q9Y3P9 1069 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 SRPRBQ9Y5M8 271 aaKnown RBP3.91□□□□□ -1.78
GTF3A-207ENST00000482655 PPLO60437 1756 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 SBF2Q86WG5 1849 aa3.91□□□□□ -1.78
GTF3A-207ENST00000482655 TECPR2O15040 1411 aa3.9□□□□□ -1.78
GTF3A-207ENST00000482655 COL14A1Q05707 1796 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 GOLGA6L10A0A0M3HER8 536 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 DYTNA2CJ06 578 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 NPIPB13A6NJU9 1138 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 NPIPB4C9JG80 1138 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 I6L893 689 aaPredicted RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 RNMTO43148 476 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 ASAP2O43150 1006 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 STRNO43815 780 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 KIF1CO43896 1103 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TIPRLO75663 272 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 RNASEH2AO75792 299 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 GLUD1P00367 558 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 GGT5P36269 586 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 SKIV2L2P42285 1042 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 PPP3CCP48454 512 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 GLUD2P49448 558 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 CDH12P55289 794 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 RRP1P56182 461 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 ABATP80404 500 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 ARHGAP8P85298 464 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 SHBQ15464 509 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TSTQ16762 297 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TMEM268Q5VZI3 342 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TMEM71Q6P5X7 295 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 CFAP161Q6P656 301 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 Q6ZSV7 163 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 RRM2BQ7LG56 351 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 ZNF367Q7RTV3 350 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 GALNT7Q86SF2 657 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 CCDC89Q8N998 374 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 LSM14AQ8ND56 463 aaKnown RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 OR14A16Q8NHC5 309 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 CEP76Q8TAP6 659 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 RNFT2Q96EX2 444 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TREX2Q9BQ50 279 aaPredicted RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 HERC2P3Q9BVR0 1158 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 CTDSP1Q9GZU7 261 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TTC12Q9H892 705 aaPredicted RBP3.9□□□□□ -1.79
GTF3A-207ENST00000482655 TAS2R10Q9NYW0 307 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 HCN3Q9P1Z3 774 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 CNPY2Q9Y2B0 182 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 PCDHGB1Q9Y5G3 927 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 KIF1AQ12756 1690 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 KNDC1Q76NI1 1749 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 IFT172Q9UG01 1749 aa3.9□□□□□ -1.79
GTF3A-207ENST00000482655 ADGRB2O60241 1585 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 HFM1A2PYH4 1435 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 FSD2A1L4K1 749 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 C17orf102A2RUQ5 167 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 PGPEP1LA6NFU8 196 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 GAGE10A6NGK3 116 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 K7ENM7 598 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 F9P00740 461 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 MMP3P08254 477 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 ENO3P13929 434 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-207ENST00000482655 RFC1P35251 1148 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-207ENST00000482655 ARL3P36405 182 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 RFX5P48382 616 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-207ENST00000482655 ART1P52961 327 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 MVDP53602 400 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 PMS2P54278 862 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 GAS1P54826 345 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 DCAF7P61962 342 aa3.89□□□□□ -1.79
GTF3A-207ENST00000482655 SETQ01105 290 aaPredicted RBP3.89□□□□□ -1.79
GTF3A-207ENST00000482655 TDGQ13569 410 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms