RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 ZNF711Q9Y462 761 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 SPO11Q9Y5K1 396 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 ZNF318Q5VUA4 2279 aa12.58□□□□□ -0.4
TRAPPC12-218ENST00000479897 TRPM6Q9BX84 2022 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 HEATR9A2RTY3 570 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 SDR42E2A6NKP2 422 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 AVILO75366 819 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 CRTAMO95727 393 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 PRKCGP05129 697 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 CTPS1P17812 591 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 LHCGRP22888 699 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 ADRA1DP25100 572 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 MGAT1P26572 445 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 OXTRP30559 389 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 HMGCLP35914 325 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 SESN2P58004 480 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 VSNL1P62760 191 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 ELF2Q15723 593 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 CNGA3Q16281 694 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 MSS51Q4VC12 460 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 PCID2Q5JVF3 399 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 FNBP1LQ5T0N5 605 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 CERCAMQ5T4B2 595 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 NEK5Q6P3R8 708 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 NLRP9Q7RTR0 991 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 GLT6D1Q7Z4J2 308 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 CCNJLQ8IV13 435 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 C1orf210Q8IVY1 113 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 AGGF1Q8N302 714 aaeCLIP12.57□□□□□ -0.41e-8■□□□□ 9.3
TRAPPC12-218ENST00000479897 CBARPQ8N350 705 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 DTWD2Q8NBA8 298 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 PPHLN1Q8NEY8 458 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 IFT81Q8WYA0 676 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 KIFC1Q9BW19 673 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 C11orf16Q9NQ32 467 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 SYBUQ9NX95 663 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.57□□□□□ -0.42e-7■■■■□ 25.2
TRAPPC12-218ENST00000479897 FBXO4Q9UKT5 387 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 NFU1Q9UMS0 254 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 SOX13Q9UN79 622 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 TCAF1Q9Y4C2 921 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 TEX264Q9Y6I9 313 aa12.57□□□□□ -0.4
TRAPPC12-218ENST00000479897 C1orf232A0A0U1RR37 186 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 FAM237BA0A1B0GVD1 139 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 MAGEB16A2A368 324 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 MROH6A6NGR9 719 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PRR33A8MZF0 331 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PLK4O00444 970 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 AXIN1O15169 862 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 LAMTOR5O43504 91 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 LDB2O43679 373 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 GPR37L1O60883 481 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PIRTP0C851 137 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 MYBL2P10244 700 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 ZNF140P52738 457 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 STC1P52823 247 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 NUBP1P53384 320 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 FAM193AP78312 1265 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 CREB5Q02930 508 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 ACVR1Q04771 509 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 DHX9Q08211 1270 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 ARHGEF7Q14155 803 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 POU6F1Q14863 301 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 AGERQ15109 404 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 MAP7D1Q3KQU3 841 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 BBS9Q3SYG4 887 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 CCDC38Q502W7 563 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 LRRC73Q5JTD7 316 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 LRRC66Q68CR7 880 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 KIAA1161Q6NSJ0 714 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 CRTC1Q6UUV9 634 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 LIPIQ6XZB0 460 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 CCNI2Q6ZMN8 369 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 LYSMD3Q7Z3D4 306 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 TSPAN33Q86UF1 283 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 MAML2Q8IZL2 1156 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PGBD3Q8N328 593 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 BLOC1S5Q8TDH9 187 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 SMIM14Q96QK8 99 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 WDR83Q9BRX9 315 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PARD6BQ9BYG5 372 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 BTBD1Q9H0C5 482 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PCED1AQ9H1Q7 454 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 ZFYVE1Q9HBF4 777 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 CD93Q9NPY3 652 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 PIH1D1Q9NWS0 290 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 KCTD5Q9NXV2 234 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 WSB2Q9NYS7 404 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 GGT7Q9UJ14 662 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 ITM2BQ9Y287 266 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 A0A0C4DFX4 3053 aa12.56□□□□□ -0.4
TRAPPC12-218ENST00000479897 FANCMQ8IYD8 2048 aa12.55□□□□□ -0.4
TRAPPC12-218ENST00000479897 IGHV1OR15-9A0A0B4J2B8 117 aa12.55□□□□□ -0.4
TRAPPC12-218ENST00000479897 RGSL1A5PLK6 1076 aa12.55□□□□□ -0.4
TRAPPC12-218ENST00000479897 C2orf81A6NN90 581 aa12.55□□□□□ -0.4
TRAPPC12-218ENST00000479897 H7C0S8 307 aa12.55□□□□□ -0.4
TRAPPC12-218ENST00000479897 TTC4O95801 387 aa12.55□□□□□ -0.4
TRAPPC12-218ENST00000479897 C1SP09871 688 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms