RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 QPCTQ16769 361 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 HSP90AA5PQ58FG0 334 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 ESRP1Q6NXG1 681 aaKnown RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 BRAT1Q6PJG6 821 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 DPY19L3Q6ZPD9 716 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 Q6ZVU0 165 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 USP45Q70EL2 814 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 SDCCAG8Q86SQ7 713 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 C12orf40Q86WS4 652 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 CAMK1DQ8IU85 385 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 ST13P5Q8NFI4 369 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 OR6P1Q8NGX9 317 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 OR6K2Q8NGY2 324 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 DCAKDQ8WVC6 231 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 ALKBH8Q96BT7 664 aaKnown RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 MRGPRX3Q96LB0 322 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 FCRL3Q96P31 734 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 SELENOSQ9BQE4 189 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 TRIM56Q9BRZ2 755 aaKnown RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 GPR63Q9BZJ6 419 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 MAGEE1Q9HCI5 957 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 IARS2Q9NSE4 1012 aaKnown RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 GTSE1Q9NYZ3 720 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 CTNNAL1Q9UBT7 734 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 SUN2Q9UH99 717 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 PKP3Q9Y446 797 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 CCDC78A2IDD5 438 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 TTC34A8MYJ7 566 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 STX7O15400 261 aaKnown RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 RPP40O75818 363 aaKnown RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 PIGNO95427 931 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 PRNPP04156 253 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 PDHA1P08559 390 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 CYP2A6P11509 494 aaPredicted RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 OPRD1P41143 372 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 NBL1P41271 181 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 ABL2P42684 1182 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 PFKPQ01813 784 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 TDGQ13569 410 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 IHHQ14623 411 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 SEPT7Q16181 437 aaKnown RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 TNFAIP8L3Q5GJ75 292 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 TEDDM1Q5T9Z0 273 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 TMEM215Q68D42 235 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 MRNIPQ6NTE8 343 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 NEPROQ6NW34 567 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 SERPINA13PQ6UXR4 307 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 PACS1Q6VY07 963 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 KDM7AQ6ZMT4 941 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 KIAA0408Q6ZU52 694 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 STRA8Q7Z7C7 330 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 SRRM1Q8IYB3 904 aaKnown RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 OR2A12Q8NGT7 310 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 HCAR2Q8TDS4 363 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 SORCS1Q8WY21 1168 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 OR8D1Q8WZ84 308 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 P2RY13Q9BPV8 354 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 IQCGQ9H095 443 aaKnown RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 C8orf33Q9H7E9 229 aaPredicted RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 PLAC1Q9HBJ0 212 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 TRPV5Q9NQA5 729 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 EURLQ9NYK6 297 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 NKIRAS1Q9NYS0 192 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 DUSP12Q9UNI6 340 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 SMG5Q9UPR3 1016 aaKnown RBP12.27□□□□□ -0.45
MRPL55-227ENST00000475832 CHD5Q8TDI0 1954 aa12.27□□□□□ -0.45
MRPL55-227ENST00000475832 A0A0J9YYE9 177 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 CAPN8A6NHC0 703 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 OTOL1A6NHN0 477 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 CXorf49A8MYA2 514 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 PRRT4C9JH25 899 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 TRAFD1O14545 582 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 GALR2O43603 387 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 LDB2O43679 373 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 ZNF821O75541 412 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 PRLP01236 227 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 TRBC1P01850 177 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 UGT2B4P06133 528 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 BRAFP15056 766 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 GCAP28676 217 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 PPARGP37231 505 aaPredicted RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 TNFRSF4P43489 277 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 PTPRNQ16849 979 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 GAB4Q2WGN9 574 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 HNRNPA1L2Q32P51 320 aaKnown RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 SDE2Q6IQ49 451 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 AFTPHQ6ULP2 937 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 TRABD2AQ86V40 505 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 EXOC3L1Q86VI1 746 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 SLC44A3Q8N4M1 653 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 FRS2Q8WU20 508 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 PIH1D2Q8WWB5 315 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 SCG3Q8WXD2 468 aaKnown RBP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 DNASE1L2Q92874 299 aa12.26□□□□□ -0.45
MRPL55-227ENST00000475832 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.26□□□□□ -0.45
MRPL55-227ENST00000475832 MSANTD3Q96H12 275 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms