RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 CCNCP24863 283 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 IGFALSP35858 605 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CSNK1DP48730 415 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 ACADVLP49748 655 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 PPIDQ08752 370 aaKnown RBP12.9□□□□□ -0.34
SHISA5-211ENST00000460758 SLC10A7Q0GE19 358 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 SGCGQ13326 291 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 XRCC4Q13426 336 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 FZD2Q14332 565 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 DNTTIP2Q5QJE6 756 aaKnown RBP12.9□□□□□ -0.34
SHISA5-211ENST00000460758 TIGD7Q6NT04 549 aaPredicted RBP12.9□□□□□ -0.34
SHISA5-211ENST00000460758 DHRS13Q6UX07 377 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 B4GALNT4Q76KP1 1039 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 TMPRSS7Q7RTY8 843 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 SRLQ86TD4 932 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 MARCH9Q86YJ5 346 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CAMK1DQ8IU85 385 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CCDC13Q8IYE1 715 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 SLC25A45Q8N413 288 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 KDF1Q8NAX2 398 aaPredicted RBP12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CCNYQ8ND76 341 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 DENND6BQ8NEG7 585 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 ACTRT1Q8TDG2 376 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CENPTQ96BT3 561 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CAPZA3Q96KX2 299 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 NSMCE3Q96MG7 304 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 QKIQ96PU8 341 aaKnown RBP eCLIP12.9□□□□□ -0.34
SHISA5-211ENST00000460758 TUBGCP5Q96RT8 1024 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 LGMNQ99538 433 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 CINPQ9BW66 212 aaPredicted RBP12.9□□□□□ -0.34
SHISA5-211ENST00000460758 BRD8Q9H0E9 1235 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 SUV39H2Q9H5I1 410 aa12.9□□□□□ -0.34
SHISA5-211ENST00000460758 SPTY2D1-AS1A0A0U1RR47 76 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TMEM8BA6NDV4 472 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 HACD1B0YJ81 288 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 H7C0C1 242 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TRIM38O00635 465 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 FPGTO14772 594 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 RFPL3O75679 317 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PRKCGP05129 697 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 DGKAP23743 735 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ATP5OP48047 213 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 EIF3EP60228 445 aaKnown RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PFN3P60673 137 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 SEMG2Q02383 582 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 AP1B1Q10567 949 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PDE1CQ14123 709 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 GRM3Q14832 879 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PRKD1Q15139 912 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 UGP2Q16851 508 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PROX2Q3B8N5 592 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TMEM52BQ4KMG9 183 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF542PQ5EBM4 170 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 CCNI2Q6ZMN8 369 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZC3H18Q86VM9 953 aaKnown RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PARGQ86W56 976 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PGBD5Q8N414 524 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TP53I13Q8NBR0 393 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 HCAR2Q8TDS4 363 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TFB1MQ8WVM0 346 aaKnown RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ATG4AQ8WYN0 398 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZCCHC14Q8WYQ9 949 aaKnown RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 MAML1Q92585 1016 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ECHDC3Q96DC8 303 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF641Q96N77 438 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZNF599Q96NL3 588 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PSKH2Q96QS6 385 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 NAP1L3Q99457 506 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 FRMD8P1Q9BZ68 369 aaPredicted RBP12.89□□□□□ -0.35
SHISA5-211ENST00000460758 PCDH12Q9NPG4 1184 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ZMIZ1Q9ULJ6 1067 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 ACACAQ13085 2346 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 FREM2Q5SZK8 3169 aa12.89□□□□□ -0.35
SHISA5-211ENST00000460758 TTC24A2A3L6 582 aaPredicted RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 MATN3O15232 486 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 FFAR2O15552 330 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 SIGLEC6O43699 453 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 TM7SF2O76062 418 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 CAPNS1P04632 268 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 RBP3P10745 1247 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 NME1P15531 152 aaKnown RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 XPAP23025 273 aaPredicted RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 SERPINA4P29622 427 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 MMP12P39900 470 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 RABIFP47224 123 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 SUOXP51687 545 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 CLDN6P56747 220 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 ELP6Q0PNE2 266 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 RALGDSQ12967 914 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 LBRQ14739 615 aaKnown RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 IRF4Q15306 451 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 CFAP58Q5T655 872 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 BRAT1Q6PJG6 821 aa12.88□□□□□ -0.35
SHISA5-211ENST00000460758 DCP2Q8IU60 420 aaKnown RBP12.88□□□□□ -0.35
SHISA5-211ENST00000460758 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms