RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 CASP14P31944 242 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 TRIM23P36406 574 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 SSR1P43307 286 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 MMP13P45452 471 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 SOWAHCQ53LP3 525 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 CRTC1Q6UUV9 634 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 OR56A4Q8NGH8 313 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 PCDH19Q8TAB3 1148 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 ZNF564Q8TBZ8 553 aaPredicted RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 FAM71BQ8TC56 605 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 PDCD6IPQ8WUM4 868 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 FUBP1Q96AE4 644 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 NOD2Q9HC29 1040 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 GPR34Q9UPC5 381 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 SHROOM3Q8TF72 1996 aa17.64■□□□□ 0.41
PDLIM2-208ENST00000416159 IL4RP24394 825 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 HNRNPH3P31942 346 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 VIPR1P32241 457 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 ERVPABLB-1P60509 514 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 PNCKQ6P2M8 343 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 ZNF248Q8NDW4 579 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 OR6C4Q8NGE1 309 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 CRELD1Q96HD1 420 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 COQ10AQ96MF6 247 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 RBM15Q96T37 977 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 CCDC3Q9BQI4 270 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 ENTPD2Q9Y5L3 495 aa17.63■□□□□ 0.41
PDLIM2-208ENST00000416159 LRP4O75096 1905 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 TMEM202A6NGA9 273 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 H2AFZP0C0S5 128 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 ARSEP51690 589 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 PCBP4P57723 403 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 MAXP61244 160 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 CCDC173Q0VFZ6 552 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 TRAF2Q12933 501 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 MMRN1Q13201 1228 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 SPIDRQ14159 915 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 CNGA3Q16281 694 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 IGF2-ASQ6U949 168 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 H2AFVQ71UI9 128 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 CBARPQ8N350 705 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 TEX26Q8N6G2 289 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 KYQ8NBH2 561 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 OR1E3Q8WZA6 343 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 NUS1Q96E22 293 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 PDXPQ96GD0 296 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 XPO4Q9C0E2 1151 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 PRORYQ9H606 182 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 WDR26Q9H7D7 661 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 SIRPGQ9P1W8 387 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 CTTNBP2NLQ9P2B4 639 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 UVRAGQ9P2Y5 699 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 LCMT1Q9UIC8 334 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 NENFQ9UMX5 172 aa17.62■□□□□ 0.41
PDLIM2-208ENST00000416159 PTPRQQ9UMZ3 2332 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PSMD11O00231 422 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 NTN3O00634 580 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PROSCO94903 275 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 HEXIM1O94992 359 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PGLSO95336 258 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 KRT10P13645 584 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 RBMS1P29558 406 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 DPYSL3Q14195 570 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PAFAH1B3Q15102 231 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PDK2Q15119 407 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 TCEA2Q15560 299 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 TSR1Q2NL82 804 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 ZSCAN23Q3MJ62 389 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 C3orf38Q5JPI3 329 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 ARMC12Q5T9G4 340 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 TIGD7Q6NT04 549 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 OGFOD3Q6PK18 319 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 NYAP1Q6ZVC0 841 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 TAF8Q7Z7C8 310 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 MAP7D3Q8IWC1 876 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 NDUFAF2Q8N183 169 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 KCTD6Q8NC69 237 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 GPR156Q8NFN8 814 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 SCRN2Q96FV2 425 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 ATXN7L3BQ96GX2 97 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 HIC2Q96JB3 615 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 LGMNQ99538 433 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 FGF22Q9HCT0 170 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 NT5MQ9NPB1 228 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PHPT1Q9NRX4 125 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 THSD1Q9NS62 852 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 SATB2Q9UPW6 733 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 PPIL1Q9Y3C6 166 aa17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 COL27A1Q8IZC6 1860 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-208ENST00000416159 CBFA2T2O43439 604 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 CD48P09326 243 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 MYCLP1P12525 358 aaPredicted RBP17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 CES1P23141 567 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 GARSP41250 739 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 ITKQ08881 620 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 TRIM14Q14142 442 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 ARHGEF7Q14155 803 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 SLC18A3Q16572 532 aa17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 IFI16Q16666 785 aaKnown RBP17.6■□□□□ 0.41
PDLIM2-208ENST00000416159 ATP13A4Q4VNC1 1196 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms