RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 PNPLA4P41247 253 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LOXL3P58215 753 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TBL3Q12788 808 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 IKQ13123 557 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 USP10Q14694 798 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 ZNF648Q5T619 568 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 CCDC144NLQ6NUI1 221 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GPR135Q8IZ08 494 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ADGRG5Q8IZF4 528 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 B3GALNT2Q8NCR0 500 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 RRNAD1Q96FB5 475 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 WDYHV1Q96HA8 205 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FEM1CQ96JP0 617 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 CABS1Q96KC9 395 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LINC00615Q96LM1 132 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 NLRP4Q96MN2 994 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ACPTQ9BZG2 426 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SLC6A15Q9H2J7 730 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TASP1Q9H6P5 420 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 MCM9Q9NXL9 1143 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ETAA1Q9NY74 926 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 HSPB7Q9UBY9 170 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 POLLQ9UGP5 575 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FAM153AQ9UHL3 310 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 IRAK3Q9Y616 596 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 AOX1Q06278 1338 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ARHGEF17Q96PE2 2063 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 TRIOBPQ9H2D6 2365 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 FAM25EA8MYX2 175 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KCNJ18B7U540 433 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 HRKO00198 91 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GSC2O15499 205 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ADAM23O75077 832 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GUCY1B2O75343 617 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 DAB1O75553 588 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 B3GALNT1O75752 331 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 NCR1O76036 304 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 C1QTNF9P0C862 333 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GSTM2P28161 218 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 HNF4AP41235 474 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 MSH2P43246 934 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 CLCN3P51790 818 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 POLE2P56282 527 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 CTAG1AP78358 180 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 CCNA1P78396 465 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ADAM17P78536 824 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PPATQ06203 517 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LRRC74AQ0VAA2 488 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 SLC39A6Q13433 755 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KCNJ12Q14500 433 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KRT33BQ14525 404 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GRM7Q14831 915 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 HLFQ16534 295 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 EDRF1Q3B7T1 1238 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GXYLT1Q4G148 440 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 STXBP5Q5T5C0 1151 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LRCH2Q5VUJ6 765 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ANO7Q6IWH7 933 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KIF6Q6ZMV9 814 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 MAPKAPK5Q8IW41 473 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KLHL7Q8IXQ5 586 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ABRAQ8N0Z2 381 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 LILRA2Q8N149 483 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 MRPL43Q8N983 215 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 USP38Q8NB14 1042 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GMCL1P1Q8NEA9 526 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 OCC1Q8TAD7 63 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 GDPD5Q8WTR4 605 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TFAP2BQ92481 460 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 CORO2AQ92828 525 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 MISP3Q96FF7 219 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PARK7Q99497 189 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 MOV10L1Q9BXT6 1211 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 TEX13BQ9BXU2 312 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TRIM7Q9C029 511 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 REXO4Q9GZR2 422 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 TSPY26PQ9H489 355 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 ARHGEF38Q9NXL2 777 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 PLA2G3Q9NZ20 509 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 NLKQ9UBE8 527 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 UBA2Q9UBT2 640 aaPredicted RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 CNOT8Q9UFF9 292 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 INTS6Q9UL03 887 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 GAKO14976 1311 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 KIAA1671Q9BY89 1806 aa2.64□□□□□ -1.99
MCF2-204ENST00000414978 TCF20Q9UGU0 1960 aaKnown RBP2.64□□□□□ -1.99
MCF2-204ENST00000414978 XDHP47989 1333 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CCL15-CCL14A0A0B4J2E2 113 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 A0A1B0GTW7 788 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 LIPT2A6NK58 231 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 GOLGA6L6A8MZA4 724 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 TMEM232C9JQI7 657 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 QSOX1O00391 747 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CPLX1O14810 134 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 ADAMDEC1O15204 470 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 CTIFO43310 598 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 VEGFDO43915 354 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 SYNCRIPO60506 623 aaKnown RBP2.63□□□□□ -1.99
MCF2-204ENST00000414978 WDR47O94967 919 aa2.63□□□□□ -1.99
MCF2-204ENST00000414978 METTL18O95568 372 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms