RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NXNL1Q96CM4 212 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 VN1R3Q9BXE9 311 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 SYTL2Q9HCH5 934 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 SCUBE2Q9NQ36 999 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 TCF7L2Q9NQB0 619 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 IGSF5Q9NSI5 407 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 CATSPERZQ9NTU4 200 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 NLE1Q9NVX2 485 aaPredicted RBP13.62□□□□□ -0.23
LIMS1-205ENST00000410093 ARMCX1Q9P291 453 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 CPSF2Q9P2I0 782 aaKnown RBP13.62□□□□□ -0.23
LIMS1-205ENST00000410093 TMCO1Q9UM00 188 aa13.62□□□□□ -0.23
LIMS1-205ENST00000410093 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 PRR5-ARHGAP8B1AHC4 643 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 PRRG1O14668 218 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 DLX3O60479 287 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 IPO13O94829 963 aaKnown RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 UPP2O95045 317 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 GJB5O95377 273 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 WISP3O95389 354 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 SEC24AO95486 1093 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 SBK3P0C264 359 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 TFEBP19484 476 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 MAPK8P45983 427 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 ARHGAP8P85298 464 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 NFKB2Q00653 900 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 GRIN2CQ14957 1233 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 TECRLQ5HYJ1 363 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 CNSTQ6PJW8 725 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 NAPRTQ6XQN6 538 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.61□□□□□ -0.236e-12■■■■■ 38.1
LIMS1-205ENST00000410093 KDELC2Q7Z4H8 507 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 CIR1Q86X95 450 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 TREML1Q86YW5 311 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 SCUBE1Q8IWY4 988 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 CPSF7Q8N684 471 aaKnown RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 ACVR1CQ8NER5 493 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 MAFAQ8NHW3 353 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 RHEBL1Q8TAI7 183 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 HEXDCQ8WVB3 486 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 STMN2Q93045 179 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 DENND2DQ9H6A0 471 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 RC3H2Q9HBD1 1191 aaKnown RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 MRPL17Q9NRX2 175 aaKnown RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 STOML1Q9UBI4 398 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 HCSTQ9UBK5 93 aa13.61□□□□□ -0.23
LIMS1-205ENST00000410093 AGO1Q9UL18 857 aaKnown RBP13.61□□□□□ -0.23
LIMS1-205ENST00000410093 CCDC78A2IDD5 438 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 TLL1O43897 1013 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 PEX11AO75192 247 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 PIGNO95427 931 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 ANP32DO95626 131 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 OLFM2O95897 454 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 THRAP10827 490 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 FDXRP22570 491 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 GLDCP23378 1020 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 ABCG1P45844 678 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 NAGLUP54802 743 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 MXRA7P84157 204 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 HERC3Q15034 1050 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 SMAD1Q15797 465 aaKnown RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 CMPK2Q5EBM0 449 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 ARL13AQ5H913 290 aaPredicted RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 AARS2Q5JTZ9 985 aaKnown RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 MPP7Q5T2T1 576 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 RFWD3Q6PCD5 774 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 MAVSQ7Z434 540 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 PTAR1Q7Z6K3 402 aaPredicted RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 DNAJB7Q7Z6W7 309 aaPredicted RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 MFSD6LQ8IWD5 586 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 HOMEZQ8IX15 550 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 FAM217AQ8IXS0 508 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 CFAP52Q8N1V2 620 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 RBM15BQ8NDT2 890 aaKnown RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 BLOC1S5Q8TDH9 187 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 VWCEQ96DN2 955 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 PRICKLE1Q96MT3 831 aaPredicted RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 SPON2Q9BUD6 331 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 LSM7Q9UK45 103 aaKnown RBP13.6□□□□□ -0.23
LIMS1-205ENST00000410093 ARHGAP26Q9UNA1 814 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 CDYLQ9Y232 598 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 OBSL1O75147 1896 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 GBF1Q92538 1859 aa13.6□□□□□ -0.23
LIMS1-205ENST00000410093 DENND4CQ5VZ89 1909 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 A0A0D9SEW6 157 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 A8MUI8 341 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 MUSKO15146 869 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 SMIM24O75264 130 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 KLKB1P03952 638 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 CCDC166P0CW27 439 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 RPL17P18621 184 aaKnown RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 LPOP22079 712 aaPredicted RBP13.59□□□□□ -0.23
LIMS1-205ENST00000410093 PMLP29590 882 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 ARRB2P32121 409 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 AVPR1AP37288 418 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 STC1P52823 247 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 KDSRQ06136 332 aa13.59□□□□□ -0.23
LIMS1-205ENST00000410093 NAA25Q14CX7 972 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms