RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 CLCN4P51793 760 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 PLK1P53350 603 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 EPHA5P54756 1037 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TAS2R39P59534 338 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 RPL26P61254 145 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 RHOAP61586 193 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 AP1S1P61966 158 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ARF5P84085 180 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CYP4F8P98187 520 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 MPP1Q00013 466 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ITGA9Q13797 1035 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 SPRED3Q2MJR0 410 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ARHGAP15Q53QZ3 475 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 KLC3Q6P597 504 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 NCEH1Q6PIU2 408 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CNSTQ6PJW8 725 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ZYG11AQ6WRX3 759 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CLNKQ7Z7G1 428 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 SLC41A1Q8IVJ1 513 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ARID3BQ8IVW6 561 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TNS4Q8IZW8 715 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF557Q8N988 423 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ACVR1CQ8NER5 493 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 POF1BQ8WVV4 589 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CCDC126Q96EE4 140 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CDKN2AIPNLQ96HQ2 116 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 SCYL1Q96KG9 808 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 C1QTNF1Q9BXJ1 281 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TMEM120AQ9BXJ8 343 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TDRD1Q9BXT4 1180 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 TLR9Q9NR96 1032 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 FBXO6Q9NRD1 293 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 VPS51Q9UID3 782 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 RPL26L1Q9UNX3 145 aaKnown RBP6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 SORCS3Q9UPU3 1222 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 KCTD3Q9Y597 815 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ACTL7AQ9Y615 435 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 ARL5AQ9Y689 179 aa6.29□□□□□ -1.4
GTF3C3-202ENST00000409364 CCDC162PA2VCL2 907 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 HIDE1A8MVS5 230 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 C5orf67F2Z3F1 127 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LEFTY2O00292 366 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CCL16O15467 120 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ITM2AO43736 263 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 XYLBO75191 536 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GJB3O75712 270 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GOT2P00505 430 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LTA4HP09960 611 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CSKP41240 450 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GSK3AP49840 483 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ARSDP51689 593 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 HK2P52789 917 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 AQP5P55064 265 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NCALDP61601 193 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 IRF9Q00978 393 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GALNT3Q14435 633 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 KRT72Q14CN4 511 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ACAP2Q15057 778 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TBCCQ15814 346 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 HECTD2Q5U5R9 776 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LIPMQ5VYY2 423 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PLPP4Q5VZY2 271 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM91A1Q658Y4 838 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM45BPQ6NSW5 357 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ELMSAN1Q6PJG2 1045 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 LINGO4Q6UY18 593 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ZCCHC23Q6ZST2 131 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ASRGL1Q7L266 308 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GLT6D1Q7Z4J2 308 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CEP97Q8IW35 865 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 BBS7Q8IWZ6 715 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CMTM8Q8IZV2 173 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CENPLQ8N0S6 344 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 FSTL5Q8N475 847 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 FAM45AQ8TCE6 357 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 PDCD6IPQ8WUM4 868 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 KCTD4Q8WVF5 259 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 INPP5DQ92835 1189 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NXNL1Q96CM4 212 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 NSL1Q96IY1 281 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 DNAJC1Q96KC8 554 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 RILPQ96NA2 401 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GPR78Q96P69 363 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TMEM237Q96Q45 408 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 C19orf43Q9BQ61 176 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 C20orf27Q9GZN8 174 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ILKAPQ9H0C8 392 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 MRPL46Q9H2W6 279 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ZNF395Q9H8N7 513 aaPredicted RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 POPDC3Q9HBV1 291 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 MAGEE1Q9HCI5 957 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 GPAMQ9HCL2 828 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ARHGEF3Q9NR81 526 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CATSPERZQ9NTU4 200 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 ABCB8Q9NUT2 735 aa6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 INTS10Q9NVR2 710 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 CPSF2Q9P2I0 782 aaKnown RBP6.28□□□□□ -1.4
GTF3C3-202ENST00000409364 TBC1D14Q9P2M4 693 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms