RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PRAMEP78395 509 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 UNC50Q53HI1 259 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 GPR158Q5T848 1215 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 OVOS1Q6IE37 1185 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 KRT80Q6KB66 452 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 PPP4R4Q6NUP7 873 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CYHR1Q6ZMK1 362 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 RPS27LQ71UM5 84 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 PTAR1Q7Z6K3 402 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 PACRGLQ8N7B6 248 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TRIML2Q8N7C3 387 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 OR2T34Q8NGX1 318 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 OR2T3Q8NH03 318 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TRPC4APQ8TEL6 797 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 EZH1Q92800 747 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 PEX13Q92968 403 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TMEM79Q9BSE2 394 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ERVK-6Q9BXR3 956 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ANKRD60Q9BZ19 345 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TRIM15Q9C019 465 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ZCWPW1Q9H0M4 648 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ALG9Q9H6U8 611 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 NT5MQ9NPB1 228 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 MYRFQ9Y2G1 1151 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 AK5Q9Y6K8 562 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 NYNRINQ9P2P1 1898 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 AQP12BA6NM10 295 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 GPR182O15218 404 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ZNF623O75123 536 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 MOCS2O96007 188 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SPATA31D3P0C874 917 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 RHOQP17081 205 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 GPX3P22352 226 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 YWHAQP27348 245 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CD86P42081 329 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SLC7A2P52569 658 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ITKQ08881 620 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 FSCN1Q16658 493 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 UGT3A2Q3SY77 523 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SPATS1Q496A3 300 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 MTX3Q5HYI7 312 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 NOMO2Q5JPE7 1267 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CLEC6AQ6EIG7 209 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 TMEM207Q6UWW9 146 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ZBTB49Q6ZSB9 765 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SPATA31D4Q6ZUB0 917 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ERMP1Q7Z2K6 904 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 AMIGO2Q86SJ2 522 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SCD5Q86SK9 330 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 C14orf80Q86SX3 495 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 SPATA2LQ8IUW3 424 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 FUNDC1Q8IVP5 155 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 AQP12AQ8IXF9 295 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 DRAXINQ8NBI3 349 aaPredicted RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 OR10T2Q8NGX3 314 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 OR6P1Q8NGX9 317 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 HM13Q8TCT9 377 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 PPWD1Q96BP3 646 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CYP2S1Q96SQ9 504 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CCT7Q99832 543 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 GPATCH1Q9BRR8 931 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 NOL6Q9H6R4 1146 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 POPDC3Q9HBV1 291 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 FLRT1Q9NZU1 646 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 ABCD2Q9UBJ2 740 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CNOT6Q9ULM6 557 aaKnown RBP10.76□□□□□ -0.69
CLIP4-204ENST00000404424 PHF24Q9UPV7 400 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 CEPT1Q9Y6K0 416 aa10.76□□□□□ -0.69
CLIP4-204ENST00000404424 H3BNH8 94 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 HNRNPRO43390 633 aaKnown RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 HTRA2O43464 458 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 CDH2P19022 906 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 GRIK1P39086 918 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 ALDH3B2P48448 385 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 CDKN2DP55273 166 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 CYTH1Q15438 398 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 C9orf131Q5VYM1 1079 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 HMBOX1Q6NT76 420 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 ISLR2Q6UXK2 745 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 CYP2R1Q6VVX0 501 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 RAB44Q7Z6P3 723 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 TEX26Q8N6G2 289 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 B4GALNT2Q8NHY0 566 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 RHEBL1Q8TAI7 183 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 HDAC10Q969S8 669 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 RMND5BQ96G75 393 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 UROC1Q96N76 676 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 TMEM209Q96SK2 561 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 TCF12Q99081 682 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 SLC29A1Q99808 456 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 NOL11Q9H8H0 719 aaKnown RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 AKTIPQ9H8T0 292 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 CCM2LQ9NUG4 571 aaPredicted RBP10.75□□□□□ -0.69
CLIP4-204ENST00000404424 TMEM248Q9NWD8 314 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 TLR6Q9Y2C9 796 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 PATJQ8NI35 1801 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 A0A0J9YYE9 177 aa10.75□□□□□ -0.69
CLIP4-204ENST00000404424 MYOCOSA0A1B0GUC4 107 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms