RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 PPP4R4Q6NUP7 873 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 DNAAF5Q86Y56 855 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 SLC44A1Q8WWI5 657 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 ZFYVE1Q9HBF4 777 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 H3BM21 787 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 ABLIM1O14639 778 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 ENDOD1O94919 500 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 IFNGP01579 166 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 GOT1P17174 413 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 TNFSF9P41273 254 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 BLVRAP53004 296 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 OASLQ15646 514 aaKnown RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 LRRC36Q1X8D7 754 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 DPY19L1Q2PZI1 675 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 ZNF621Q6ZSS3 439 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 RASAL3Q86YV0 1011 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 RTL3Q8N8U3 475 aaKnown RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 CEP295NLQ96MC4 621 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 HMG20AQ9NP66 347 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 GPN3Q9UHW5 284 aaPredicted RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 GLYATL1P3A0A0U1RQE8 302 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 CALCAP01258 141 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 GSTM5P46439 218 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 BLKP51451 505 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 MRPS22P82650 360 aaKnown RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 UGCGQ16739 394 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 P2RY11Q96G91 374 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 MRPL45Q9BRJ2 306 aaKnown RBP15.67■□□□□ 0.1
GNE-202ENST00000396594 CCNE2O96020 404 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 COX4I1P13073 169 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 BIKQ13323 160 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 DSELQ8IZU8 1212 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 CAMKK1Q8N5S9 505 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 POMGNT2Q8NAT1 580 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 KBTBD8Q8NFY9 601 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 ACDQ96AP0 544 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 TEKT5Q96M29 485 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 TLE6Q9H808 572 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 LGALS13Q9UHV8 139 aa15.67■□□□□ 0.1
GNE-202ENST00000396594 YDJCA8MPS7 323 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 SLC7A4O43246 635 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 UNC5CO95185 931 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 MAP3K6O95382 1288 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 BCL10O95999 233 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 ESR1P03372 595 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 GRIA4P48058 902 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 ACAP2Q15057 778 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 PFKFB4Q16877 469 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 ATXN7L2Q5T6C5 722 aaPredicted RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 PDE12Q6L8Q7 609 aaKnown RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 EPHX4Q8IUS5 362 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 RAVER1Q8IY67 606 aaKnown RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 ADAM32Q8TC27 787 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 AZIN2Q96A70 460 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 USP20Q9Y2K6 914 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 ZNF711Q9Y462 761 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 CSDE1O75534 798 aaKnown RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 MC4RP32245 332 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 UGT2B15P54855 530 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 STX4Q12846 297 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 GPR158Q5T848 1215 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 CENPIQ92674 756 aaPredicted RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 AP3D1O14617 1153 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 MFN2O95140 757 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 PRPS2P11908 318 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 GPR33Q49SQ1 333 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 CEP78Q5JTW2 689 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 LRRC74BQ6ZQY2 392 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 SLC41A1Q8IVJ1 513 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 C1orf50Q9BV19 199 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 SNX15Q9NRS6 342 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 PNMA8BQ9ULN7 279 aaPredicted RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 ZMYND8Q9ULU4 1186 aaPredicted RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 FZD9O00144 591 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 PEX1O43933 1283 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 OLR1P78380 273 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 KIAA1324Q6UXG2 1013 aaKnown RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 PRR23BQ6ZRT6 265 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 TPGS1Q6ZTW0 290 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 TBC1D21Q8IYX1 336 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 ZBTB2Q8N680 514 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 GLB1L3Q8NCI6 653 aaPredicted RBP15.66■□□□□ 0.1
GNE-202ENST00000396594 DENND1AQ8TEH3 1009 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 OSBPL11Q9BXB4 747 aa15.66■□□□□ 0.1
GNE-202ENST00000396594 GSAPA4D1B5 854 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 TMEM150BA6NC51 233 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 E9PAM4 449 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 TAF4O00268 1085 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 VARSP26640 1264 aaKnown RBP15.65■□□□□ 0.1
GNE-202ENST00000396594 CDH5P33151 784 aaPredicted RBP15.65■□□□□ 0.1
GNE-202ENST00000396594 OR1D2P34982 312 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 NIPAL1Q6NVV3 410 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.65■□□□□ 0.1
GNE-202ENST00000396594 SLC44A2Q8IWA5 706 aaPredicted RBP15.65■□□□□ 0.1
GNE-202ENST00000396594 UNC5BQ8IZJ1 945 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 TTC29Q8NA56 475 aaPredicted RBP15.65■□□□□ 0.1
GNE-202ENST00000396594 MPZL2O60487 215 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 XKR6Q5GH73 641 aa15.65■□□□□ 0.1
GNE-202ENST00000396594 SULT1C3Q6IMI6 304 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms