RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TLK1Q9UKI8 766 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 TRPC5Q9UL62 973 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SLC8A2Q9UPR5 921 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ITM2BQ9Y287 266 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 FAM32AQ9Y421 112 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 FADS3Q9Y5Q0 445 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NOX1Q9Y5S8 564 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 DNAH14Q0VDD8 3507 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 LTBP1Q14766 1721 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 KIAA1217Q5T5P2 1943 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 TCRBV3S1A0A5B6 114 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 OR51F1A6NGY5 319 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 KPNA7A9QM74 516 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ZBTB42B2RXF5 422 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 H0Y858 1186 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 UBDO15205 165 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 AQP9O43315 295 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 BMP10O95393 424 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ESRRBO95718 433 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 PIGRP01833 764 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 C8BP07358 591 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MYL4P12829 197 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CAPN3P20807 821 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SPRP35270 261 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 TAS2R39P59534 338 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SLC6A3Q01959 620 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CREB5Q02930 508 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 PTPRCAPQ14761 206 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CYP51A1Q16850 503 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 KIF19Q2TAC6 998 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SLC10A6Q3KNW5 377 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CCDC153Q494R4 210 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 BOLA3Q53S33 107 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 TXNDC11Q6PKC3 985 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ZYG11AQ6WRX3 759 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ZC3HC1Q86WB0 502 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 DEFB106AQ8N104 65 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 FAM86B1Q8N7N1 296 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 FLAD1Q8NFF5 587 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 OR6B3Q8NGW1 331 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NDNFQ8TB73 568 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 NSUN6Q8TEA1 469 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 GIMAP1Q8WWP7 306 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 LZICQ8WZA0 190 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 BORCS5Q969J3 196 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 LRRC39Q96DD0 335 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MAGED4Q96JG8 741 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 HNRNPABQ99729 332 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CPNE1Q99829 537 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SEZ6LQ9BYH1 1024 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 FRMD8P1Q9BZ68 369 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MRPL46Q9H2W6 279 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 RPF1Q9H9Y2 349 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SMURF2Q9HAU4 748 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 SPAG4Q9NPE6 437 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 TLR9Q9NR96 1032 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CMTM6Q9NX76 183 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 IFT80Q9P2H3 777 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CD300AQ9UGN4 299 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 BCAP29Q9UHQ4 241 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 WDR37Q9Y2I8 494 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MAFBQ9Y5Q3 323 aaPredicted RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 USP3Q9Y6I4 520 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 MKI67P46013 3256 aaKnown RBP5.44□□□□□ -1.54
ATG4A-204ENST00000372246 ARID2Q68CP9 1835 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 UBR3Q6ZT12 1888 aa5.44□□□□□ -1.54
ATG4A-204ENST00000372246 CITO14578 2027 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 A0A087WXM4 84 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 A0A087WZ62 844 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SPATA31C2B4DYI2 1134 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 WNT10BO00744 389 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SH3BP5O60239 455 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 KDM1AO60341 852 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GPC4O75487 556 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 USP2O75604 605 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 INMTO95050 263 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 JCHAINP01591 159 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CAPNS1P04632 268 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 ASNSP08243 561 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 LINC00032P0C843 101 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TXNP10599 105 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PTPN3P26045 913 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TKTP29401 623 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 AXLP30530 894 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SLC7A1P30825 629 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GGT5P36269 586 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 HPCAL1P37235 193 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SULT1E1P49888 294 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 SEPHS1P49903 392 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 DIO3P55073 304 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 TPTEP56180 551 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PCSK7Q16549 785 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 MEP1AQ16819 746 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 RGS21Q2M5E4 152 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 PDCD4Q53EL6 469 aaKnown RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 CYBRD1Q53TN4 286 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 NBPF12Q5TAG4 269 aaPredicted RBP5.43□□□□□ -1.54
ATG4A-204ENST00000372246 GRTP1Q5TC63 336 aa5.43□□□□□ -1.54
ATG4A-204ENST00000372246 OTUD1Q5VV17 481 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms