RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 PRR23CQ6ZRP0 262 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 DPPA4Q7L190 304 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 PRPF39Q86UA1 669 aaKnown RBP4□□□□□ -1.77
CNOT4-202ENST00000356162 ZCCHC9Q8N567 271 aaKnown RBP4□□□□□ -1.77
CNOT4-202ENST00000356162 ACTL9Q8TC94 416 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 CXorf40AQ8TE69 158 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 EDARADDQ8WWZ3 215 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 PIGKQ92643 395 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 PPP1R2P1Q96PQ5 205 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 SEMA3CQ99985 751 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 ORAI3Q9BRQ5 295 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 C1QTNF7Q9BXJ2 289 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 HEMGNQ9BXL5 484 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 ZDHHC5Q9C0B5 715 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 SLC25A51Q9H1U9 297 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 NOD2Q9HC29 1040 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 GLOD4Q9HC38 313 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 PARD6AQ9NPB6 346 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 KCND1Q9NSA2 647 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 SEMA4GQ9NTN9 838 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 SEPT10Q9P0V9 454 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 TRHDEQ9UKU6 1024 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 PHTF1Q9UMS5 762 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 RPL26L1Q9UNX3 145 aaKnown RBP4□□□□□ -1.77
CNOT4-202ENST00000356162 SCN8AQ9UQD0 1980 aa4□□□□□ -1.77
CNOT4-202ENST00000356162 MUC3AQ02505 3323 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CACNA1HO95180 2353 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3DA0A087WVF3 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3IA0A087WXS9 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3EA0A087X179 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3KA0A087X1G2 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 A0A1W2PQU0 124 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SERTM1A2A2V5 107 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3FA6NER0 549 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3LB9A6J9 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KCNK1O00180 336 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KCNK3O14649 394 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KHNYNO15037 678 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 BCAT2O15382 392 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KIF5CO60282 957 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 JCHAINP01591 159 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SERPINF2P08697 491 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3HP0C7X1 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 HNRNPA2B1P22626 353 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 VIPR1P32241 457 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 LIMK1P53667 647 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 MAXP61244 160 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 POLR2LP62875 67 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SNRPNP63162 240 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RPS21P63220 83 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RACK1P63244 317 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ITKQ08881 620 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 NIPAL4Q0D2K0 466 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SPEM2Q0P670 501 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 WASHC5Q12768 1159 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RALGDSQ12967 914 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF284Q2VY69 593 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TEX44Q53QW1 395 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3GQ6DHY5 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3CQ6IPX1 549 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 AADACL2Q6P093 401 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KYAT3Q6YP21 454 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 USP45Q70EL2 814 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZSWIM9Q86XI8 627 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SLC13A5Q86YT5 568 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CAMK1DQ8IU85 385 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RGL4Q8IZJ4 473 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TBC1D3Q8IZP1 549 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 NDUFAF2Q8N183 169 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SLC35F6Q8N357 371 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 DEFB119Q8N690 84 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 C12orf50Q8NA57 414 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ARRDC2Q8TBH0 407 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 HTR3CQ8WXA8 447 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TADA1Q96BN2 335 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 BIRC7Q96CA5 298 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 FEM1CQ96JP0 617 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PBKQ96KB5 322 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TEKT5Q96M29 485 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 MCCC1Q96RQ3 725 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TLR10Q9BXR5 811 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 NUSAP1Q9BXS6 441 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TDRD1Q9BXT4 1180 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TSPAN10Q9H1Z9 355 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 GBA3Q9H227 469 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 CAPN10Q9HC96 672 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TM9SF3Q9HD45 589 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PCDH12Q9NPG4 1184 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 KLHL8Q9P2G9 620 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 EIF2B4Q9UI10 523 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PYCARDQ9ULZ3 195 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 SLC6A14Q9UN76 642 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZFR2Q9UPR6 939 aaKnown RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 ZKSCAN5Q9Y2L8 839 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 PPIL1Q9Y3C6 166 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 JRKLQ9Y4A0 524 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 TTLL3Q9Y4R7 772 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 RAI2Q9Y5P3 530 aa3.99□□□□□ -1.77
CNOT4-202ENST00000356162 GPC6Q9Y625 555 aaPredicted RBP3.99□□□□□ -1.77
CNOT4-202ENST00000356162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms