RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NRP2O60462 931 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 FKBP9O95302 570 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 LTA4HP09960 611 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 FAM58BPP0C7Q3 252 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 GNAZP19086 355 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ATP5F1P24539 256 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 ARSDP51689 593 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CDC42EP1Q00587 391 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 HSPA14Q0VDF9 509 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CDH18Q13634 790 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 KCNA10Q16322 511 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CPSF6Q16630 551 aaKnown RBP eCLIP8.25□□□□□ -1.09
HPS4-201ENST00000336873 FKBP9P1Q75LS8 142 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 MARK2Q7KZI7 788 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 OR10T2Q8NGX3 314 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 NUDT8Q8WV74 236 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CANT1Q8WVQ1 401 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 TMEM74Q96NL1 305 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 OLFM3Q96PB7 478 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 HGH1Q9BTY7 390 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CCDC106Q9BWC9 280 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CCSER2Q9H7U1 834 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 COQ10BQ9H8M1 238 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 LRRC42Q9Y546 428 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 HEMK1Q9Y5R4 338 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 TRPV2Q9Y5S1 764 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 LTBP1Q14766 1721 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 A0A0J9YYE9 177 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 PIRO00625 290 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CABYRO75952 493 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 NTRK1P04629 796 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 UQCRBP14927 111 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 XPAP23025 273 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 EEF1DP29692 281 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 PBLDP30039 288 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 CHN2P52757 468 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 DGCR6Q14129 220 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 C16orf72Q14CZ0 275 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 C11orf91Q3C1V1 193 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ZNF792Q3KQV3 632 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ATP6AP1LQ52LC2 224 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 C16orf87Q6PH81 154 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 MZB1Q8WU39 189 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 AUTS2Q8WXX7 1259 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CDH9Q9ULB4 789 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 VPS4AQ9UN37 437 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 LINC00854A0A1B0GVQ3 168 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 MAGEB16A2A368 324 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 TYW5A2RUC4 315 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 PRR23AA6NEV1 266 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 MAGEC1O60732 1142 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ATP6V1G1O75348 118 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 GPR32O75388 356 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ABCB1P08183 1280 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 CNPP09543 421 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 PRKAR2AP13861 404 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 GDF5P43026 501 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 CDK7P50613 346 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 SH3BGRP55822 239 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 MTA1Q13330 715 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ZNF177Q13360 481 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 PLD1Q13393 1074 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 BOP1Q14137 746 aaKnown RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 TBCCQ15814 346 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 LIN52Q52LA3 116 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 TAF2Q6P1X5 1199 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 FAM151BQ6UXP7 276 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 AGMOQ6ZNB7 445 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 LPCAT2Q7L5N7 544 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ANKRD46Q86W74 232 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 FAM126BQ8IXS8 530 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 ZMIZ2Q8NF64 920 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 TSPAN17Q96FV3 270 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 GPR21Q99679 349 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 MMADHCQ9H3L0 296 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 ENTPD7Q9NQZ7 604 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 UBAP1Q9NZ09 502 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 MARCH4Q9P2E8 410 aaPredicted RBP8.25□□□□□ -1.09
HPS4-201ENST00000336873 RAD54BQ9Y620 910 aa8.25□□□□□ -1.09
HPS4-201ENST00000336873 DNAH14Q0VDD8 3507 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SYCE1LA8MT33 242 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 IPO13O94829 963 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 ZNF682O95780 498 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ALDH2P05091 517 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 RHOCP08134 193 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SNRPB2P08579 225 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 GJA1P17302 382 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 MAP4P27816 1152 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 OR1D2P34982 312 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 ALDH7A1P49419 539 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 OXCT1P55809 520 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 TMEM214Q6NUQ4 689 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 PAQR9Q6ZVX9 377 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 BNIPLQ7Z465 357 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 DCP1BQ8IZD4 617 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 ATP6V0D2Q8N8Y2 350 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 PNPT1Q8TCS8 783 aaKnown RBP8.24□□□□□ -1.09
HPS4-201ENST00000336873 ACMSDQ8TDX5 336 aa8.24□□□□□ -1.09
HPS4-201ENST00000336873 SMAD5Q99717 465 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms