RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 ACSL1P33121 698 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 DHX9Q08211 1270 aaKnown RBP15.16■□□□□ 0.02
CMC1-201ENST00000334841 ELP6Q0PNE2 266 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 SFSWAPQ12872 951 aaKnown RBP15.16■□□□□ 0.02
CMC1-201ENST00000334841 MAP7D1Q3KQU3 841 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 CCDC38Q502W7 563 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 GLT6D1Q7Z4J2 308 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 FAM160A2Q8N612 972 aaPredicted RBP15.16■□□□□ 0.02
CMC1-201ENST00000334841 FRMD1Q8N878 549 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 OR14C36Q8NHC7 312 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 RLN3Q8WXF3 142 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 EID2BQ96D98 161 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 WRAP53Q9BUR4 548 aaKnown RBP15.16■□□□□ 0.02
CMC1-201ENST00000334841 HACD3Q9P035 362 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 ARL5AQ9Y689 179 aa15.16■□□□□ 0.02
CMC1-201ENST00000334841 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 PRR33A8MZF0 331 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 E7ESA3 106 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 LDB2O43679 373 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 GPR37L1O60883 481 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 ZNF217O75362 1048 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 CLDN7O95471 211 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 C1SP09871 688 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 NFKBIAP25963 317 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 NPY2RP49146 381 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 ARL4CP56559 192 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 VSNL1P62760 191 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 CSTF1Q05048 431 aaKnown RBP15.15■□□□□ 0.02
CMC1-201ENST00000334841 CCDC15Q0P6D6 951 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 SEPT6Q14141 434 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 FASTKD3Q14CZ7 662 aaKnown RBP15.15■□□□□ 0.02
CMC1-201ENST00000334841 ELF2Q15723 593 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 BBS9Q3SYG4 887 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 TMEM52BQ4KMG9 183 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 PDIK1LQ8N165 341 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 BRSK1Q8TDC3 778 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 SIGLEC10Q96LC7 697 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 RANBP9Q96S59 729 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 FMO2Q99518 471 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 TRIM56Q9BRZ2 755 aaKnown RBP15.15■□□□□ 0.02
CMC1-201ENST00000334841 IL22Q9GZX6 179 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 BTBD1Q9H0C5 482 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 TRABDQ9H4I3 376 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 SGK2Q9HBY8 427 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.15■□□□□ 0.02
CMC1-201ENST00000334841 BFARQ9NZS9 450 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 TCAF1Q9Y4C2 921 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 KCTD3Q9Y597 815 aa15.15■□□□□ 0.02
CMC1-201ENST00000334841 CCDC163A0A0D9SF12 145 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PRR23AA6NEV1 266 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 C10orf142B7Z368 130 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 H0Y858 1186 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 NEMP1O14524 444 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 TSPAN6O43657 245 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 BUD23O43709 281 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 ELFN1P0C7U0 828 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 C6P13671 934 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 ZNF30P17039 623 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 GM2AP17900 193 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 CD6P30203 668 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 FNTBP49356 437 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 LIG3P49916 1009 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 ZNF140P52738 457 aaPredicted RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 STC1P52823 247 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PPP2CBP62714 309 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PPP2CAP67775 309 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PDIA2Q13087 525 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 CBLBQ13191 982 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PTPRCAPQ14761 206 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 TAF1AQ15573 450 aaPredicted RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 DNAJC21Q5F1R6 531 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 WDR93Q6P2C0 686 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 LIPIQ6XZB0 460 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 HSD11B1LQ7Z5J1 315 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 IGDCC3Q8IVU1 814 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 GPR161Q8N6U8 529 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 PPHLN1Q8NEY8 458 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 TOE1Q96GM8 510 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 SRPK1Q96SB4 655 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 GPR63Q9BZJ6 419 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 FOXP3Q9BZS1 431 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PHACTR1Q9C0D0 580 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 ZFYVE1Q9HBF4 777 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PREBQ9HCU5 417 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 WSB2Q9NYS7 404 aaPredicted RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 MTRF1LQ9UGC7 380 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 MBD1Q9UIS9 605 aaPredicted RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 FBXO4Q9UKT5 387 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 ZFR2Q9UPR6 939 aaKnown RBP15.14■□□□□ 0.01
CMC1-201ENST00000334841 INVSQ9Y283 1065 aa15.14■□□□□ 0.01
CMC1-201ENST00000334841 PLXND1Q9Y4D7 1925 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 EML5Q05BV3 1969 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 A0A0C4DFX4 3053 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 CCDC78A2IDD5 438 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 HEATR9A2RTY3 570 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 MROH6A6NGR9 719 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 FAM47DPA6NHR8 397 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 SDR42E2A6NKP2 422 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 MMP20O60882 483 aa15.13■□□□□ 0.01
CMC1-201ENST00000334841 PCDH8O95206 1070 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms