RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 MTHFD1P11586 935 aaKnown RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 NCK1P16333 377 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ATP6V1B2P21281 511 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 GABRB3P28472 473 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ATICP31939 592 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 LAMC2Q13753 1193 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SMU1Q2TAY7 513 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 CENPLQ8N0S6 344 aaPredicted RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 REPS2Q8NFH8 660 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SIK2Q9H0K1 926 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 MUC3BQ9H195 1237 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 UNC93B1Q9H1C4 597 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SNTG2Q9NY99 539 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 OAZ3Q9UMX2 235 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 TNFSF13BQ9Y275 285 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ILVBLA1L0T0 632 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 CCL22O00626 93 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 INPP4BO15327 924 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 TEX28O15482 410 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 STMN1P16949 149 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 PLIN5Q00G26 463 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 NSUN2Q08J23 767 aaKnown RBP eCLIP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC12A1Q13621 1099 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 VPS26BQ4G0F5 336 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ARHGAP17Q68EM7 881 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ESRP1Q6NXG1 681 aaKnown RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 CYS1Q717R9 158 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 CNTD1Q8N815 330 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SHCBP1Q8NEM2 672 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 TEPSINQ96N21 525 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 GOLGA2P5Q9HBQ8 144 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 DUS2Q9NX74 493 aaKnown RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC2A6Q9UGQ3 507 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 MID2Q9UJV3 735 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 M0R3G1 203 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 AGRPO00253 132 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 PMPCBO75439 489 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 INHBBP09529 407 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 TAS2R39P59534 338 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 YBX1P67809 324 aaKnown RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 MERTKQ12866 999 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 CCDC58Q4VC31 144 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 TMTC4Q5T4D3 741 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 HFE2Q6ZVN8 426 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 LDB1Q86U70 411 aaPredicted RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SLCO6A1Q86UG4 719 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 PIGZQ86VD9 579 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ZC3HC1Q86WB0 502 aaKnown RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 TMEM126BQ8IUX1 230 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF420Q8TAQ5 688 aaPredicted RBP14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 HEXDCQ8WVB3 486 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 FEM1CQ96JP0 617 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 CDHR5Q9HBB8 845 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC30A1Q9Y6M5 507 aa14.2□□□□□ -0.14
PCDHB3-201ENST00000231130 LRRC37AA6NMS7 1700 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PGK1P00558 417 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SNRPB2P08579 225 aaKnown RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PROZP22891 400 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 AKAP5P24588 427 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 TPI1P60174 286 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PCSK7Q16549 785 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ABRAXAS1Q6UWZ7 409 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 METTL7BQ6UX53 244 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 CLEC14AQ86T13 490 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 TERB1Q8NA31 727 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 DNAJB14Q8TBM8 379 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PTCD2Q8WV60 388 aaKnown RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 RNF34Q969K3 372 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF486Q96H40 463 aaPredicted RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 MROQ9BYG7 248 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ANKRD60Q9BZ19 345 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 TRIT1Q9H3H1 467 aaKnown RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PDZD7Q9H5P4 517 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 VTI1BQ9UEU0 232 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 HACL1Q9UJ83 578 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ADAM28Q9UKQ2 775 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 PSME2Q9UL46 239 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ZBTB42B2RXF5 422 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 DFFAO00273 331 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 DPYSL4O14531 572 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 EI24O14681 340 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 EIF2S1P05198 315 aaKnown RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 CXCR3P49682 368 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 RPS6KA2Q15349 733 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF470Q6ECI4 717 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 CRTC3Q6UUV7 619 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ADCK1Q86TW2 530 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 GATAD2AQ86YP4 633 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 CAMK1DQ8IU85 385 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 DHRSXQ8N5I4 330 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 DACH2Q96NX9 599 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 ZNF347Q96SE7 839 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 IL12RB2Q99665 862 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 WDR6Q9NNW5 1121 aaKnown RBP14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 BPTFQ12830 3046 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SOWAHBA6NEL2 793 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 NRP2O60462 931 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 AP2A1O95782 977 aa14.19□□□□□ -0.14
PCDHB3-201ENST00000231130 SLC4A1P02730 911 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms