RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ZC3H18Q86VM9 953 aaKnown RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 CCDC112Q8NEF3 446 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 KLHDC7BQ96G42 594 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 OXNAD1Q96HP4 312 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 AGAP3Q96P47 875 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 QKIQ96PU8 341 aaKnown RBP eCLIP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 TLR10Q9BXR5 811 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 TCEAL2Q9H3H9 227 aaPredicted RBP13.78□□□□□ -0.2
VEGFA-201ENST00000230480 GLOD4Q9HC38 313 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 UCKL1Q9NWZ5 548 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 AMFRQ9UKV5 643 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 PCOLCE2Q9UKZ9 415 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 PHTF1Q9UMS5 762 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 ZKSCAN5Q9Y2L8 839 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 PCDHGB2Q9Y5G2 931 aa13.78□□□□□ -0.2
VEGFA-201ENST00000230480 A0A0J9YYE9 177 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 ACACBO00763 2458 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 RECQL5O94762 991 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 TOP3BO95985 862 aaKnown RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 SOD1P00441 154 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 TRBC1P01850 177 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 FUCA1P04066 466 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 COL5A1P20908 1838 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 RBL1P28749 1068 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 NAP1L1P55209 391 aaKnown RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 ELP6Q0PNE2 266 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 OVGP1Q12889 678 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 MSLNQ13421 630 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 SIX1Q15475 284 aaPredicted RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 PPM1JQ5JR12 505 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 DENND6BQ8NEG7 585 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
VEGFA-201ENST00000230480 LYSMD1Q96S90 227 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 RBM15Q96T37 977 aaKnown RBP eCLIP13.77□□□□□ -0.214e-9■■□□□ 12
VEGFA-201ENST00000230480 SLC25A51Q9H1U9 297 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
VEGFA-201ENST00000230480 SPAARA0A1B0GVQ0 90 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 DKK1O94907 266 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 CER1O95813 267 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 CPP00450 1065 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 C1SP09871 688 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 NFKB1P19838 968 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 EPHA8P29322 1005 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-201ENST00000230480 AKT2P31751 481 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 VIPR1P32241 457 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 TRIM23P36406 574 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 ITKQ08881 620 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 XRCC4Q13426 336 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 SLC45A4Q5BKX6 768 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 ARMC12Q5T9G4 340 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 PSAPL1Q6NUJ1 521 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 Q6ZVL8 140 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 SLCO6A1Q86UG4 719 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 CCDC50Q8IVM0 306 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 KLHDC8BQ8IXV7 354 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 SLC35B2Q8TB61 432 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 CXorf40AQ8TE69 158 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 PDCD6IPQ8WUM4 868 aaKnown RBP13.76□□□□□ -0.21
VEGFA-201ENST00000230480 TFB1MQ8WVM0 346 aaKnown RBP13.76□□□□□ -0.21
VEGFA-201ENST00000230480 P3H4Q92791 437 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 MLPHQ9BV36 600 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-201ENST00000230480 LGR4Q9BXB1 951 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 LZTFL1Q9NQ48 299 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 GDF3Q9NR23 364 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 MYLKQ15746 1914 aa13.76□□□□□ -0.21
VEGFA-201ENST00000230480 COL27A1Q8IZC6 1860 aaPredicted RBP13.76□□□□□ -0.21
VEGFA-201ENST00000230480 LY6G6EA0A0G2JKS1 128 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 LOC285095A0A1B0GVY8 99 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 MIF4GDA9UHW6 222 aaKnown RBP13.75□□□□□ -0.21
VEGFA-201ENST00000230480 TRIM38O00635 465 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 NEMP1O14524 444 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 PPP1R12AO14974 1030 aaPredicted RBP13.75□□□□□ -0.21
VEGFA-201ENST00000230480 ATXN1LP0C7T5 689 aaKnown RBP13.75□□□□□ -0.21
VEGFA-201ENST00000230480 CES1P23141 567 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 ETV3P41162 512 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 C21orf59P57076 290 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 SGCGQ13326 291 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 INPP5AQ14642 412 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 NAXDQ8IW45 347 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 BBS5Q8N3I7 341 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 NSMCE1Q8WV22 266 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 HTR3CQ8WXA8 447 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 MRGPRX2Q96LB1 330 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 PCDH9Q9HC56 1237 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 UBP1Q9NZI7 540 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 SEPT10Q9P0V9 454 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.75□□□□□ -0.21
VEGFA-201ENST00000230480 SPO11Q9Y5K1 396 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 U3KQA8 63 aa13.75□□□□□ -0.21
VEGFA-201ENST00000230480 A6NNZ2 444 aa13.74□□□□□ -0.21
VEGFA-201ENST00000230480 HACD1B0YJ81 288 aa13.74□□□□□ -0.21
VEGFA-201ENST00000230480 ANKRD66B4E2M5 251 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms