RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 RBM44Q6ZP01 1051 aaKnown RBP22.2■■□□□ 1.14
VTI1B-201ENST00000216456 RFLNAQ6ZTI6 216 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 B3GNT8Q7Z7M8 397 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 FSTL5Q8N475 847 aaPredicted RBP22.2■■□□□ 1.14
VTI1B-201ENST00000216456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.2■■□□□ 1.14
VTI1B-201ENST00000216456 LZTR1Q8N653 840 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 PRR11Q96HE9 360 aaPredicted RBP22.2■■□□□ 1.14
VTI1B-201ENST00000216456 HIC2Q96JB3 615 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 FCRL3Q96P31 734 aaPredicted RBP22.2■■□□□ 1.14
VTI1B-201ENST00000216456 CAPN11Q9UMQ6 739 aa22.2■■□□□ 1.14
VTI1B-201ENST00000216456 TMEM110-MUSTN1A8MSY1 372 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 HTRA2O43464 458 aaPredicted RBP22.19■■□□□ 1.14
VTI1B-201ENST00000216456 LHCGRP22888 699 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 CDH6P55285 790 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 ZBED6P86452 979 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 PIGHQ14442 188 aaPredicted RBP22.19■■□□□ 1.14
VTI1B-201ENST00000216456 ELOCQ15369 112 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 CCDC122Q5T0U0 273 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 ESRP1Q6NXG1 681 aaKnown RBP22.19■■□□□ 1.14
VTI1B-201ENST00000216456 HSD11B1LQ7Z5J1 315 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 TSPAN33Q86UF1 283 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 ATPAF2Q8N5M1 289 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 ARL10Q8N8L6 244 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 NIPA2Q8N8Q9 360 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 COQ10AQ96MF6 247 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 ZNF599Q96NL3 588 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 NUDCD1Q96RS6 583 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 LGMNQ99538 433 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 PACSIN1Q9BY11 444 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 TMEM168Q9H0V1 697 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 NCKIPSDQ9NZQ3 722 aa22.19■■□□□ 1.14
VTI1B-201ENST00000216456 FASNP49327 2511 aaKnown RBP22.18■■□□□ 1.14
VTI1B-201ENST00000216456 MFSD11O43934 449 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 CPP00450 1065 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 TNFP01375 233 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 FUCA1P04066 466 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 CTPS1P17812 591 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 CASP14P31944 242 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 RPIAP49247 311 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 BLKP51451 505 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 RENBPP51606 427 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 ZNF135P52742 658 aaPredicted RBP22.18■■□□□ 1.14
VTI1B-201ENST00000216456 CCL7P80098 99 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 ACAP1Q15027 740 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 ALKBH5Q6P6C2 394 aaKnown RBP22.18■■□□□ 1.14
VTI1B-201ENST00000216456 SDR16C5Q8N3Y7 309 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 OR56A4Q8NGH8 313 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 SYN2Q92777 582 aaPredicted RBP22.18■■□□□ 1.14
VTI1B-201ENST00000216456 GLMNQ92990 594 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 RBM15Q96T37 977 aaKnown RBP eCLIP22.18■■□□□ 1.141e-9■■■■■ 31.5
VTI1B-201ENST00000216456 MGME1Q9BQP7 344 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 FOXP3Q9BZS1 431 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 NT5MQ9NPB1 228 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 IP6K2Q9UHH9 426 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 MOSPD1Q9UJG1 213 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 NENFQ9UMX5 172 aa22.18■■□□□ 1.14
VTI1B-201ENST00000216456 A0A1W2PQM1 296 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 CFAP69A5D8W1 941 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 NPIPB15A6NHN6 443 aaPredicted RBP22.17■■□□□ 1.14
VTI1B-201ENST00000216456 PDHA1P08559 390 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 ALPIP09923 528 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 ETV3P41162 512 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 MMP13P45452 471 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 ARSEP51690 589 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 TAS2R40P59535 323 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 KIAA1024LP59773 190 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 CXADRP78310 365 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 KRT81Q14533 505 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 PNCKQ6P2M8 343 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 TEKT4Q8WW24 435 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 NAT6Q93015 286 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 ZNF578Q96N58 590 aaPredicted RBP22.17■■□□□ 1.14
VTI1B-201ENST00000216456 CPNE5Q9HCH3 593 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 CYP4F12Q9HCS2 524 aa22.17■■□□□ 1.14
VTI1B-201ENST00000216456 BZW2Q9Y6E2 419 aaKnown RBP22.17■■□□□ 1.14
VTI1B-201ENST00000216456 SHROOM3Q8TF72 1996 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 CACNB4O00305 520 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 NTN3O00634 580 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 DXOO77932 396 aaKnown RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 HEXIM1O94992 359 aaKnown RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 TRIM23P36406 574 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 PCBP4P57723 403 aaKnown RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 POLR2LP62875 67 aaKnown RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 SPIDRQ14159 915 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 TAF8Q7Z7C8 310 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 GKN2Q86XP6 184 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 Q8N9G6 341 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 FAM46DQ8NEK8 389 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 NUS1Q96E22 293 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 WDR26Q9H7D7 661 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 ATXN7L1Q9ULK2 861 aaPredicted RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 LUC7L2Q9Y383 392 aaKnown RBP22.16■■□□□ 1.14
VTI1B-201ENST00000216456 DGKBQ9Y6T7 804 aa22.16■■□□□ 1.14
VTI1B-201ENST00000216456 B4DGG1 531 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 NOBOXO60393 691 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 RPLP0P05388 317 aaKnown RBP22.15■■□□□ 1.14
VTI1B-201ENST00000216456 VIPR1P32241 457 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 TPM4P67936 248 aa22.15■■□□□ 1.14
VTI1B-201ENST00000216456 DPYSL3Q14195 570 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms