RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 SLC44A1Q8WWI5 657 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 KNDC1Q76NI1 1749 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 CA12O43570 354 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 ENO2P09104 434 aaPredicted RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 ABRQ12979 859 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 TIMM50Q3ZCQ8 353 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 APTXQ7Z2E3 356 aaKnown RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 RASAL3Q86YV0 1011 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 STYXQ8WUJ0 223 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 ZNF184Q99676 751 aaPredicted RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 LGR5O75473 907 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 UMPSP11172 480 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 PKMP14618 531 aaKnown RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 POMGNT2Q8NAT1 580 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 SMG7Q92540 1137 aaKnown RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 IKZF4Q9H2S9 585 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 RERGLQ9H628 205 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 POLR1DQ9Y2S0 133 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 ARL5CA6NH57 179 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 MFSD11O43934 449 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 HADHBP55084 474 aaKnown RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 ADI1Q9BV57 179 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 RHBGQ9H310 441 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 CORO1CQ9ULV4 474 aaPredicted RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 CHKBQ9Y259 395 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 SLC45A1Q9Y2W3 748 aa23.21■■□□□ 1.31
TARBP1-201ENST00000040877 COL14A1Q05707 1796 aaKnown RBP23.21■■□□□ 1.31
TARBP1-201ENST00000040877 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.2■■□□□ 1.31
TARBP1-201ENST00000040877 PDE9AO76083 593 aa23.2■■□□□ 1.31
TARBP1-201ENST00000040877 CXCR3P49682 368 aa23.2■■□□□ 1.31
TARBP1-201ENST00000040877 MRPS22P82650 360 aaKnown RBP23.2■■□□□ 1.31
TARBP1-201ENST00000040877 TRIM71Q2Q1W2 868 aaKnown RBP23.2■■□□□ 1.31
TARBP1-201ENST00000040877 MACC1Q6ZN28 852 aa23.2■■□□□ 1.31
TARBP1-201ENST00000040877 KIAA0408Q6ZU52 694 aa23.2■■□□□ 1.31
TARBP1-201ENST00000040877 C19orf60Q96EN9 201 aa23.2■■□□□ 1.31
TARBP1-201ENST00000040877 SPACA7Q96KW9 195 aa23.2■■□□□ 1.31
TARBP1-201ENST00000040877 GLYATL1P3A0A0U1RQE8 302 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 C22orf31O95567 290 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 BCL10O95999 233 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 PRNPP04156 253 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 CLK3P49761 638 aaKnown RBP23.2■■□□□ 1.3
TARBP1-201ENST00000040877 POM121L1PQ3SYA9 428 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 CEP78Q5JTW2 689 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 PMF1Q6P1K2 205 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 AGMOQ6ZNB7 445 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 ZSCAN18Q8TBC5 510 aaPredicted RBP23.2■■□□□ 1.3
TARBP1-201ENST00000040877 FUBP3Q96I24 572 aaKnown RBP eCLIP23.2■■□□□ 1.3
TARBP1-201ENST00000040877 SLITRK2Q9H156 845 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 TGDSO95455 350 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 AP2A1O95782 977 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 NDST2P52849 883 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 PLD4Q96BZ4 506 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 SLC25A51Q9H1U9 297 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 PIK3C2AO00443 1686 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 NTRK1P04629 796 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 PCSK2P16519 638 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 CDC42P60953 191 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 IRGCQ6NXR0 463 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 GATAD2AQ86YP4 633 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 C8orf59Q8N0T1 100 aaPredicted RBP23.2■■□□□ 1.3
TARBP1-201ENST00000040877 CFAP52Q8N1V2 620 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 XPNPEP1Q9NQW7 623 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 MFHAS1Q9Y4C4 1052 aa23.2■■□□□ 1.3
TARBP1-201ENST00000040877 ISM1B1AKI9 464 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 SH3D19Q5HYK7 790 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 CERCAMQ5T4B2 595 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 TRIM40Q6P9F5 258 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 RAVER1Q8IY67 606 aaKnown RBP23.19■■□□□ 1.3
TARBP1-201ENST00000040877 ITCHQ96J02 903 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 CDH19Q9H159 772 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 PRPF19Q9UMS4 504 aaKnown RBP23.19■■□□□ 1.3
TARBP1-201ENST00000040877 IFNA16P05015 189 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 OR4Q2P0C623 313 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 TTKP33981 857 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 CRHR1P34998 444 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 FEN1P39748 380 aaKnown RBP23.19■■□□□ 1.3
TARBP1-201ENST00000040877 CCR4P51679 360 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 BIKQ13323 160 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 TAPT1Q6NXT6 567 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 ARHGAP22Q7Z5H3 698 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 C19orf18Q8NEA5 215 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 FBXO30Q8TB52 745 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 FAM84AQ96KN4 292 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 RNPEPL1Q9HAU8 725 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 LRRC4CQ9HCJ2 640 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 RAI2Q9Y5P3 530 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 STX11O75558 287 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 PBX3P40426 434 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 AP1S1P61966 158 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 CAPN13Q6MZZ7 669 aaPredicted RBP23.19■■□□□ 1.3
TARBP1-201ENST00000040877 ZFP14Q9HCL3 533 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 MRPS33Q9Y291 106 aaKnown RBP23.19■■□□□ 1.3
TARBP1-201ENST00000040877 COQ4Q9Y3A0 265 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 SMIM31A0A1B0GVY4 71 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 BBIP1A8MTZ0 92 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 BPGMP07738 259 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 MYBL2P10244 700 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 COL9A3Q14050 684 aaPredicted RBP23.19■■□□□ 1.3
TARBP1-201ENST00000040877 MFSD5Q6N075 450 aa23.19■■□□□ 1.3
TARBP1-201ENST00000040877 C12orf50Q8NA57 414 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms