RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 STARD5Q9NSY2 213 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 WDR70Q9NW82 654 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 KLQ9UEF7 1012 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 DOLKQ9UPQ8 538 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 LOXL2Q9Y4K0 774 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 ST14Q9Y5Y6 855 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 DGKBQ9Y6T7 804 aa11.12□□□□□ -0.63
DDX41-218ENST00000625286 SPENQ96T58 3664 aaKnown RBP11.12□□□□□ -0.63
DDX41-218ENST00000625286 NBPF19A0A087WUL8 3843 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 SIGLEC16A6NMB1 481 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 PES1O00541 588 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 TERTO14746 1132 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 ARHGAP6O43182 974 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 CREB3O43889 395 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 TNFP01375 233 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 GPD1P21695 349 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 SOX5P35711 763 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 TRIM23P36406 574 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 BLKP51451 505 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 GSCP56915 257 aaPredicted RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 YBEYP58557 167 aaPredicted RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 POLR2FP61218 127 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 RAD51Q06609 339 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 ELP6Q0PNE2 266 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 EIF3IQ13347 325 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 BECN1Q14457 450 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.63
DDX41-218ENST00000625286 CLCA4Q14CN2 919 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 C16orf72Q14CZ0 275 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 TBR1Q16650 682 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 PPP1R15BQ5SWA1 713 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 CERCAMQ5T4B2 595 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 LIPIQ6XZB0 460 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 ARHGAP36Q6ZRI8 547 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 USP53Q70EK8 1073 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 SPRED1Q7Z699 444 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 GKN2Q86XP6 184 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 PHF13Q86YI8 300 aaPredicted RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 FAM114A1Q8IWE2 563 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 TP53INP2Q8IXH6 220 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 ARFGAP1Q8N6T3 406 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 TSEN2Q8NCE0 465 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 SCG3Q8WXD2 468 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 USP7Q93009 1102 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 PMEPA1Q969W9 287 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 SGF29Q96ES7 293 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 CELF6Q96J87 481 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 WDR92Q96MX6 357 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 SLC39A8Q9C0K1 460 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 VPS16Q9H269 839 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 CLSTN2Q9H4D0 955 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 NLRC4Q9NPP4 1024 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 FAM207AQ9NSI2 230 aaPredicted RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 SPATS2LQ9NUQ6 558 aaKnown RBP11.11□□□□□ -0.63
DDX41-218ENST00000625286 GPATCH2LQ9NWQ4 482 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 ADAM22Q9P0K1 906 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 LRIT1Q9P2V4 623 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 IL17BQ9UHF5 180 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 SIK3Q9Y2K2 1263 aa11.11□□□□□ -0.63
DDX41-218ENST00000625286 A8MX80 341 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 TRAFD1O14545 582 aaPredicted RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 PRAMEF11O60813 436 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 RECQL5O94762 991 aaPredicted RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 LIPCP11150 499 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 CCL4P13236 92 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 GLB1P16278 677 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 CSRP3P50461 194 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 PAPOLAP51003 745 aaKnown RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 SUOXP51687 545 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 ZNF143P52747 638 aaPredicted RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 KIAA1024LP59773 190 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 MTM1Q13496 603 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 PTPRRQ15256 657 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 CA9Q16790 459 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 CLEC16AQ2KHT3 1053 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 PARP15Q460N3 678 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 AFMIDQ63HM1 303 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 SCYL2Q6P3W7 929 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 MON1BQ7L1V2 547 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 TAF8Q7Z7C8 310 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 SRLQ86TD4 932 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 C17orf82Q86X59 251 aaPredicted RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 DNAAF5Q86Y56 855 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 C3orf20Q8ND61 904 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 FAM46DQ8NEK8 389 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 OR56A4Q8NGH8 313 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 ECHDC3Q96DC8 303 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 ZNF641Q96N77 438 aaPredicted RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 TMEM74Q96NL1 305 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 STRADBQ9C0K7 418 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 RDH14Q9HBH5 336 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 UBA2Q9UBT2 640 aaPredicted RBP11.1□□□□□ -0.63
DDX41-218ENST00000625286 ATP8A1Q9Y2Q0 1164 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
DDX41-218ENST00000625286 ZFC3H1O60293 1989 aaKnown RBP11.09□□□□□ -0.63
DDX41-218ENST00000625286 TMX2-CTNND1H3BSU7 103 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms