RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ANKRD36A6QL64 1941 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 C2orf16Q68DN1 1984 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 ANKRD66B4E2M5 251 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 CFAP99D6REC4 459 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 K7ERQ8 282 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 COPEO14579 308 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SLC7A4O43246 635 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 LDB2O43679 373 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SIN3BO75182 1162 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 ASMTLO95671 621 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 PRLP01236 227 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 PABPC1P11940 636 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 ARNTP27540 789 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 CCNFP41002 786 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 MAPK8P45983 427 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 CCT5P48643 541 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 LIMK2P53671 638 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SEC24CP53992 1094 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 PDE1BQ01064 536 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SULT2A1Q06520 285 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 THOC5Q13769 683 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SMAD1Q15797 465 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SEPT7Q16181 437 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 UGP2Q16851 508 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 FAM78AQ5JUQ0 283 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 TAX1BP1Q86VP1 789 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 LMNTD2Q8IXW0 634 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 TDHQ8IZJ6 230 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 EFHBQ8N7U6 833 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 OR13J1Q8NGT2 312 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 CALML6Q8TD86 181 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 BLOC1S5Q8TDH9 187 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 BCAS4Q8TDM0 211 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 TCP10LQ8TDR4 215 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 OSCP1Q8WVF1 389 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 CKAP2Q8WWK9 683 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 FGF13Q92913 245 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 SMARCD2Q92925 531 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 PTPRN2Q92932 1015 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 ISG20Q96AZ6 181 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 APOPT1Q96IL0 206 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 ASB16Q96NS5 453 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 LRRC3BQ96PB8 259 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 FAM167BQ9BTA0 163 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 NSUN3Q9H649 340 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 MLXIPLQ9NP71 852 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 DUS2Q9NX74 493 aaKnown RBP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 MKS1Q9NXB0 559 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 GDE1Q9NZC3 331 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.96□□□□□ -0.97
CCDC47-207ENST00000612558 GGA2Q9UJY4 613 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 HS3ST2Q9Y278 367 aa8.96□□□□□ -0.97
CCDC47-207ENST00000612558 MYLKQ15746 1914 aa8.96□□□□□ -0.98
CCDC47-207ENST00000612558 GOLGA8TH3BQL2 631 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SMAD6O43541 496 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TIMM44O43615 452 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 FZD6O60353 706 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CRTAMO95727 393 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 GLP2RO95838 553 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 FAM107AO95990 144 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 PDHA1P08559 390 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HADHAP40939 763 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 VIPR2P41587 438 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 NEK3P51956 506 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HYAL1Q12794 435 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TRAF2Q12933 501 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 DHCR24Q15392 516 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 FUT11Q495W5 492 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TCEAL5Q5H9L2 206 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ATXN7L2Q5T6C5 722 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HHATQ5VTY9 493 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 FSTL4Q6MZW2 842 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 NEPROQ6NW34 567 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ANKRD54Q6NXT1 300 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 LVRNQ6Q4G3 990 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 KIAA0408Q6ZU52 694 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 VASH1Q7L8A9 365 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 KIAA0907Q7Z7F0 614 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 LPCAT1Q8NF37 534 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 BPIFB1Q8TDL5 484 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 STYXQ8WUJ0 223 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CHMP6Q96FZ7 201 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 MAGEB18Q96M61 343 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 ZNF317Q96PQ6 595 aaPredicted RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 CCT8L2Q96SF2 557 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 PAIP2Q9BPZ3 127 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 MCMBPQ9BTE3 642 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TM6SF2Q9BZW4 377 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 IQCGQ9H095 443 aaKnown RBP8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TRPV4Q9HBA0 871 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 OBP2AQ9NY56 170 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 SLC25A13Q9UJS0 675 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 FBXO10Q9UK96 956 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 C2orf81A6NN90 581 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 NDUFAB1O14561 156 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 TPP1O14773 563 aa8.95□□□□□ -0.98
CCDC47-207ENST00000612558 HOXC11O43248 304 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms