RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 DEFB133Q30KQ1 61 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 PRRT3Q5FWE3 981 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 NCBP2-AS2Q69YL0 99 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 ZCCHC8Q6NZY4 707 aaKnown RBP14.4□□□□□ -0.1
IRF3-224ENST00000599680 MARCH9Q86YJ5 346 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 RBFAQ8N0V3 343 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 PGBD5Q8N414 524 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 PDCD7Q8N8D1 485 aaKnown RBP14.4□□□□□ -0.1
IRF3-224ENST00000599680 PCDH19Q8TAB3 1148 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.4□□□□□ -0.1
IRF3-224ENST00000599680 GLMNQ92990 594 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 APOLD1Q96LR9 279 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 MGME1Q9BQP7 344 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 APOOQ9BUR5 198 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 USP29Q9HBJ7 922 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 NOD2Q9HC29 1040 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 NCKIPSDQ9NZQ3 722 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 DOLKQ9UPQ8 538 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 TTLL3Q9Y4R7 772 aa14.4□□□□□ -0.1
IRF3-224ENST00000599680 KNTC1P50748 2209 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 LRRD1A4D1F6 860 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 TRABD2BA6NFA1 517 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 RECQL5O94762 991 aaPredicted RBP14.39□□□□□ -0.11
IRF3-224ENST00000599680 MAP3K6O95382 1288 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 PEX11BO96011 259 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 ANXA6P08133 673 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 CKMT1AP12532 417 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 MX2P20592 715 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 ARSEP51690 589 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 CLDN6P56747 220 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 GALNT2Q10471 571 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 NFATC4Q14934 902 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 ARMC12Q5T9G4 340 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 DENND2CQ68D51 928 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 SARM1Q6SZW1 724 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 ENPP7Q6UWV6 458 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 LIPIQ6XZB0 460 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 HID1Q8IV36 788 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 NDUFAF2Q8N183 169 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.39□□□□□ -0.11
IRF3-224ENST00000599680 CCNYQ8ND76 341 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 MDM1Q8TC05 714 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 RFFLQ8WZ73 363 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 WDR92Q96MX6 357 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 MAK16Q9BXY0 300 aaKnown RBP14.39□□□□□ -0.11
IRF3-224ENST00000599680 POLR1EQ9GZS1 481 aaKnown RBP14.39□□□□□ -0.11
IRF3-224ENST00000599680 CAAP1Q9H8G2 361 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 B4GALT6Q9UBX8 382 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 KLQ9UEF7 1012 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 KLF15Q9UIH9 416 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 PHTF1Q9UMS5 762 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 OR1A2Q9Y585 309 aa14.39□□□□□ -0.11
IRF3-224ENST00000599680 ZFC3H1O60293 1989 aaKnown RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 SRRM3A6NNA2 597 aaPredicted RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 CACNB4O00305 520 aaPredicted RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 MATN3O15232 486 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 HTRA2O43464 458 aaPredicted RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 RASGRP1O95267 797 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 KRT1P04264 644 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 ALPIP09923 528 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 TNNT1P13805 278 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 CR2P20023 1033 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 CA4P22748 312 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 KDELR1P24390 212 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 CCNCP24863 283 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 VIPR1P32241 457 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 RPIAP49247 311 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 RALGDSQ12967 914 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 C1orf61Q13536 156 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 ARHGEF7Q14155 803 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 ELOCQ15369 112 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 USP45Q70EL2 814 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 PROSER1Q86XN7 944 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 FSTL5Q8N475 847 aaPredicted RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 FAM181AQ8N9Y4 354 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 SCG3Q8WXD2 468 aaKnown RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 TSACCQ96A04 125 aaPredicted RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 NXPE2Q96DL1 559 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 TBATAQ96M53 351 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 SEMA3CQ99985 751 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 LRRC61Q9BV99 259 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 ABCG4Q9H172 646 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 TCEAL2Q9H3H9 227 aaPredicted RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 LUC7LQ9NQ29 371 aaKnown RBP14.38□□□□□ -0.11
IRF3-224ENST00000599680 KCTD5Q9NXV2 234 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 INTUQ9ULD6 942 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 CLCA2Q9UQC9 943 aa14.38□□□□□ -0.11
IRF3-224ENST00000599680 RP1P56715 2156 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 ACACAQ13085 2346 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 DSPP15924 2871 aaKnown RBP14.37□□□□□ -0.11
IRF3-224ENST00000599680 CPED1A4D0V7 1026 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 TPP1O14773 563 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 SPOPO43791 374 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 MTA2O94776 668 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 GIMD1P0DJR0 217 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 MYF5P13349 255 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 CCNB1P14635 433 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 CES1P23141 567 aa14.37□□□□□ -0.11
IRF3-224ENST00000599680 KELP23276 732 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms