RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 ENTPD2Q9Y5L3 495 aa10.5□□□□□ -0.73
VPS4B-207ENST00000591519 COL27A1Q8IZC6 1860 aaPredicted RBP10.5□□□□□ -0.73
VPS4B-207ENST00000591519 A0A1W2PNU3 283 aaPredicted RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 ANKRD62A6NC57 917 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 CAPN5O15484 640 aaPredicted RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 INSIG1O15503 277 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 CREB3O43889 395 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 BUB1BO60566 1050 aaPredicted RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 PRAMEF11O60813 436 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 ANXA6P08133 673 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 TSHRP16473 764 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 FERP16591 822 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 BLKP51451 505 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 HK3P52790 923 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 UCNP55089 124 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 OGDHQ02218 1023 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 NSUN2Q08J23 767 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 C19orf57Q0VDD7 668 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 CCDC173Q0VFZ6 552 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 MAMLD1Q13495 774 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 C1orf61Q13536 156 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 LRRC14Q15048 493 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 FAXCQ5TGI0 409 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 PLEKHA7Q6IQ23 1121 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 BRAT1Q6PJG6 821 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 RBM44Q6ZP01 1051 aaKnown RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 SLC35F3Q8IY50 421 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 FSTL5Q8N475 847 aaPredicted RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 CPLX3Q8WVH0 158 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 WBP1Q96G27 269 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 MCEEQ96PE7 176 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 TUBGCP5Q96RT8 1024 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 LGMNQ99538 433 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 LRRC61Q9BV99 259 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 XPO4Q9C0E2 1151 aaKnown RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 THSD1Q9NS62 852 aa10.49□□□□□ -0.73
VPS4B-207ENST00000591519 UBA2Q9UBT2 640 aaPredicted RBP10.49□□□□□ -0.73
VPS4B-207ENST00000591519 LRRC53A6NM62 1247 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 CDRT15L2A8MXV6 281 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 J3KR12 359 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 NTN3O00634 580 aaPredicted RBP10.48□□□□□ -0.73
VPS4B-207ENST00000591519 DESP17661 470 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 TNFAIP3P21580 790 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 HCAR3P49019 387 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 IRF4Q15306 451 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 ELOCQ15369 112 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 ASIC2Q16515 512 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 LRRC73Q5JTD7 316 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 PERM1Q5SV97 790 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 AFMIDQ63HM1 303 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 ESRP1Q6NXG1 681 aaKnown RBP10.48□□□□□ -0.73
VPS4B-207ENST00000591519 DCUN1D2Q6PH85 259 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 PCSK4Q6UW60 755 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 ZNF354CQ86Y25 554 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 PSTKQ8IV42 348 aaKnown RBP10.48□□□□□ -0.73
VPS4B-207ENST00000591519 ARFGAP1Q8N6T3 406 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 NETO2Q8NC67 525 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 SCG3Q8WXD2 468 aaKnown RBP10.48□□□□□ -0.73
VPS4B-207ENST00000591519 ECHDC3Q96DC8 303 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 WRAP53Q9BUR4 548 aaKnown RBP10.48□□□□□ -0.73
VPS4B-207ENST00000591519 APOOQ9BUR5 198 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 EDEM3Q9BZQ6 932 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 SLC39A8Q9C0K1 460 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 PCDH12Q9NPG4 1184 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 PARVAQ9NVD7 372 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 PADI4Q9UM07 663 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 LRRK1Q38SD2 2015 aa10.48□□□□□ -0.73
VPS4B-207ENST00000591519 A0A1W2PQC6 194 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 TMEM191CA6NGB0 347 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ARHGAP42A6NI28 874 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 TMCO5BA8MYB1 307 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ERVH48-1M5A8F1 160 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 MUSKO15146 869 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 C1QL1O75973 258 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 RASGRP1O95267 797 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 PIGNO95427 931 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 HOXC4P09017 264 aaPredicted RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ALPIP09923 528 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 GZMAP12544 262 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 SKILP12757 684 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 C6P13671 934 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 XPAP23025 273 aaPredicted RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 HTR1BP28222 390 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 RBMS1P29558 406 aaKnown RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 TRIM23P36406 574 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 MMP12P39900 470 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 LIG3P49916 1009 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 PAPOLAP51003 745 aaKnown RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ZNF135P52742 658 aaPredicted RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 TMPRSS3P57727 454 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 TPI1P60174 286 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 CXADRP78310 365 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 RHDQ02161 417 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 INPP5AQ14642 412 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 RFTN1Q14699 578 aaPredicted RBP10.47□□□□□ -0.73
VPS4B-207ENST00000591519 NFATC4Q14934 902 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ALG11Q2TAA5 492 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ERMARDQ5T6L9 678 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 BROXQ5VW32 411 aa10.47□□□□□ -0.73
VPS4B-207ENST00000591519 ERAP2Q6P179 960 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms