RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 MCCC1Q96RQ3 725 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-211ENST00000589753 XAB2Q9HCS7 855 aaKnown RBP15.25■□□□□ 0.03
ATG4D-211ENST00000589753 CD93Q9NPY3 652 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 PIH1D1Q9NWS0 290 aaKnown RBP15.25■□□□□ 0.03
ATG4D-211ENST00000589753 CYP8B1Q9UNU6 501 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 BDP1A6H8Y1 2624 aa15.25■□□□□ 0.03
ATG4D-211ENST00000589753 NCOR1O75376 2440 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 CAPN8A6NHC0 703 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 AREL1O15033 823 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 TP73O15350 636 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 PLRG1O43660 514 aaKnown RBP15.24■□□□□ 0.03
ATG4D-211ENST00000589753 AP1G1O43747 822 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 IGLV3-19P01714 112 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 PIRTP0C851 137 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 MLNP12872 115 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 TDGF1P13385 188 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 TPH1P17752 444 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 OXTRP30559 389 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 PLTPP55058 493 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 CSTF1Q05048 431 aaKnown RBP15.24■□□□□ 0.03
ATG4D-211ENST00000589753 PTPRRQ15256 657 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 CAND1Q86VP6 1230 aaKnown RBP15.24■□□□□ 0.03
ATG4D-211ENST00000589753 IFT20Q8IY31 132 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 MAML2Q8IZL2 1156 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-211ENST00000589753 OR14C36Q8NHC7 312 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 UBXN4Q92575 508 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 ART4Q93070 314 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 SERPINB12Q96P63 405 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 SRPK1Q96SB4 655 aaKnown RBP15.24■□□□□ 0.03
ATG4D-211ENST00000589753 C1QTNF1Q9BXJ1 281 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 FRMD8Q9BZ67 464 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-211ENST00000589753 BTBD1Q9H0C5 482 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 MAGEE1Q9HCI5 957 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 GDF3Q9NR23 364 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 B4GALT6Q9UBX8 382 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 FBXO4Q9UKT5 387 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 FADS3Q9Y5Q0 445 aa15.24■□□□□ 0.03
ATG4D-211ENST00000589753 CCDC163A0A0D9SF12 145 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 NPIPB15A6NHN6 443 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-211ENST00000589753 A8MX80 341 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 DLL1O00548 723 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 NEMP1O14524 444 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 SPINT1O43278 529 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 VIPR1P32241 457 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 MMP12P39900 470 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 NPY2RP49146 381 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 ADPRHP54922 357 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 SESN2P58004 480 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-211ENST00000589753 TAS2R38P59533 333 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 SEMG2Q02383 582 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 DMWDQ09019 674 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 TMEM52BQ4KMG9 183 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 TMEM31Q5JXX7 168 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 ZDHHC24Q6UX98 284 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 DPPA4Q7L190 304 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 BLOC1S5Q8TDH9 187 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 IFT81Q8WYA0 676 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 LYSMD1Q96S90 227 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 FAM129AQ9BZQ8 928 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 SGK2Q9HBY8 427 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 BFARQ9NZS9 450 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 HACD3Q9P035 362 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
ATG4D-211ENST00000589753 GGT7Q9UJ14 662 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 ITM2BQ9Y287 266 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 SPO11Q9Y5K1 396 aa15.23■□□□□ 0.03
ATG4D-211ENST00000589753 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-211ENST00000589753 C1orf232A0A0U1RR37 186 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 TSPAN6O43657 245 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 AVILO75366 819 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 CD6P30203 668 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 ACSL1P33121 698 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 FNTBP49356 437 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 ARL4CP56559 192 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 RALGDSQ12967 914 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 MSLNQ13421 630 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-211ENST00000589753 MTM1Q13496 603 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 CUL1Q13616 776 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 ARHGEF7Q14155 803 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 MAP7D1Q3KQU3 841 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 USP39Q53GS9 565 aaKnown RBP15.22■□□□□ 0.03
ATG4D-211ENST00000589753 CERCAMQ5T4B2 595 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 CRTC1Q6UUV9 634 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 TSPAN33Q86UF1 283 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 WDR5BQ86VZ2 330 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 PDIK1LQ8N165 341 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 ZCCHC9Q8N567 271 aaKnown RBP15.22■□□□□ 0.03
ATG4D-211ENST00000589753 FBXO25Q8TCJ0 367 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 BRSK1Q8TDC3 778 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 CXorf40AQ8TE69 158 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 RLN3Q8WXF3 142 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 TOE1Q96GM8 510 aaKnown RBP15.22■□□□□ 0.03
ATG4D-211ENST00000589753 SPACA7Q96KW9 195 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 EPC1Q9H2F5 836 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 KDM4CQ9H3R0 1056 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 TRABDQ9H4I3 376 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 ANKZF1Q9H8Y5 726 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 PREBQ9HCU5 417 aa15.22■□□□□ 0.03
ATG4D-211ENST00000589753 WSB2Q9NYS7 404 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-211ENST00000589753 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms