RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PYCARD-AS1I3L0S3 204 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 CACNB4O00305 520 aaPredicted RBP13.79□□□□□ -0.2
HDAC5-208ENST00000588419 BUB1BO60566 1050 aaPredicted RBP13.79□□□□□ -0.2
HDAC5-208ENST00000588419 FERP16591 822 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 SUOXP51687 545 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 NDST2P52849 883 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 INHBCP55103 352 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 BCL2L1Q07817 233 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 MTM1Q13496 603 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 DENND2CQ68D51 928 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 BRAT1Q6PJG6 821 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 ARHGAP36Q6ZRI8 547 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 RAB11FIP2Q7L804 512 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 TAF8Q7Z7C8 310 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 PDCD6IPQ8WUM4 868 aaKnown RBP13.79□□□□□ -0.2
HDAC5-208ENST00000588419 TUBGCP5Q96RT8 1024 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
HDAC5-208ENST00000588419 STRADBQ9C0K7 418 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 PISDQ9UG56 409 aa13.79□□□□□ -0.2
HDAC5-208ENST00000588419 ATXN7L1Q9ULK2 861 aaPredicted RBP13.79□□□□□ -0.2
HDAC5-208ENST00000588419 TTC24A2A3L6 582 aaPredicted RBP13.78□□□□□ -0.2
HDAC5-208ENST00000588419 GOLGA6CA6NDK9 693 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 GOLGA6BA6NDN3 693 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
HDAC5-208ENST00000588419 PLD2O14939 933 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 TEX33O43247 280 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 RECQL5O94762 991 aaPredicted RBP13.78□□□□□ -0.2
HDAC5-208ENST00000588419 ITGA2BP08514 1039 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 JMJD7P0C870 316 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 GOLGA6DP0CG33 693 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 UGT1A5P35504 534 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 SCNN1BP51168 640 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 CLN3Q13286 438 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 ACOX1Q15067 660 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 PPP1R15BQ5SWA1 713 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 IGF2-ASQ6U949 168 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 CCNJLQ8IV13 435 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 SFTPA2Q8IWL1 248 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 AOPEPQ8N6M6 819 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 NPWQ8N729 165 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 FAM46DQ8NEK8 389 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 OR56A4Q8NGH8 313 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 OR1E3Q8WZA6 343 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 LIN37Q96GY3 246 aaPredicted RBP13.78□□□□□ -0.2
HDAC5-208ENST00000588419 ZNF641Q96N77 438 aaPredicted RBP13.78□□□□□ -0.2
HDAC5-208ENST00000588419 PEBP4Q96S96 227 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 LRRN3Q9H3W5 708 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 FGF22Q9HCT0 170 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 GOLGA6AQ9NYA3 693 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 DONSONQ9NYP3 566 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 MGAQ8IWI9 3026 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 COL6A6A6NMZ7 2263 aa13.78□□□□□ -0.2
HDAC5-208ENST00000588419 A0A1W2PQM1 296 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 TMEM202A6NGA9 273 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 PRPSAP2O60256 369 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 ERCC2P18074 760 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 SLC5A2P31639 672 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 RALGDSQ12967 914 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 ASIC2Q16515 512 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 MAP9Q49MG5 647 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 ERMARDQ5T6L9 678 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 RFX8Q6ZV50 586 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 CLEC14AQ86T13 490 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 HCAR2Q8TDS4 363 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 FUBP1Q96AE4 644 aaKnown RBP13.77□□□□□ -0.21
HDAC5-208ENST00000588419 ERGIC2Q96RQ1 377 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 DPEP2Q9H4A9 486 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 CYP4F12Q9HCS2 524 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 PARVAQ9NVD7 372 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 MYO1AQ9UBC5 1043 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 LOXL2Q9Y4K0 774 aa13.77□□□□□ -0.21
HDAC5-208ENST00000588419 LRRC53A6NM62 1247 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 K7ENP7 123 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 RNF8O76064 485 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ATP1A3P13637 1013 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ITIH1P19827 911 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 KELP23276 732 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 HTR7P34969 479 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 MAPK10P53779 464 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 KIAA1024LP59773 190 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 SRSF6Q13247 344 aaKnown RBP13.76□□□□□ -0.21
HDAC5-208ENST00000588419 MAMLD1Q13495 774 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ARHGEF7Q14155 803 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ZNF235Q14590 738 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 TGIF1Q15583 401 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 PHF19Q5T6S3 580 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 INO80CQ6PI98 192 aaPredicted RBP13.76□□□□□ -0.21
HDAC5-208ENST00000588419 LIPIQ6XZB0 460 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ARHGAP12Q8IWW6 846 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 TP53INP2Q8IXH6 220 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 CCL4L1Q8NHW4 92 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 TTC9Q92623 222 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 ZNF653Q96CK0 615 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 NUS1Q96E22 293 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 TMEM74Q96NL1 305 aa13.76□□□□□ -0.21
HDAC5-208ENST00000588419 CCNL2Q96S94 520 aaPredicted RBP13.76□□□□□ -0.21
HDAC5-208ENST00000588419 RBM15Q96T37 977 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms