RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 PRAMEF11O60813 436 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 ITGA2BP08514 1039 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 GSCP56915 257 aaPredicted RBP20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 ACAD10Q6JQN1 1059 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 CCL4L1Q8NHW4 92 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 PDXPQ96GD0 296 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 LIN37Q96GY3 246 aaPredicted RBP20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 TMEM168Q9H0V1 697 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 DHX35Q9H5Z1 703 aaKnown RBP20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 PDFQ9HBH1 243 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 TAS2R14Q9NYV8 317 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 CHD5Q8TDI0 1954 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 TSPAN11A1L157 253 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 TEX33O43247 280 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 DAPK3O43293 454 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 RECQL5O94762 991 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 ITIH1P19827 911 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 GRM3Q14832 879 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 PPP1R15BQ5SWA1 713 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 BRAT1Q6PJG6 821 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 ARHGAP36Q6ZRI8 547 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 CCNJLQ8IV13 435 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 MCOLN2Q8IZK6 566 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 GPR156Q8NFN8 814 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 MED8Q96G25 268 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 NSMCE3Q96MG7 304 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 RBM15Q96T37 977 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 LGR4Q9BXB1 951 aa20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 COL27A1Q8IZC6 1860 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1-204ENST00000585961 ARHGAP42A6NI28 874 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 D6RAR5 112 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 DFFAO00273 331 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 FGF10O15520 208 aaPredicted RBP20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 NOBOXO60393 691 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 JMJD7P0C870 316 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 CDK11BP21127 795 aaKnown RBP20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 MMP12P39900 470 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 NDST2P52849 883 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 MTM1Q13496 603 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 LIPIQ6XZB0 460 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 PELI3Q8N2H9 469 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 EXD3Q8N9H8 876 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 OR56A4Q8NGH8 313 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 ATL2Q8NHH9 583 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 DPEP2Q9H4A9 486 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 ATP13A3Q9H7F0 1226 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 CYP4F12Q9HCS2 524 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 FGF22Q9HCT0 170 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 LRIT1Q9P2V4 623 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 RNF215Q9Y6U7 377 aa20.21■□□□□ 0.83
CLPTM1-204ENST00000585961 B4DGG1 531 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 TMX2-CTNND1H3BSU7 103 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 CACNB4O00305 520 aaPredicted RBP20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 EEF2KO00418 725 aaKnown RBP20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 TNFAIP3P21580 790 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 PSMA2P25787 234 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 SCNN1BP51168 640 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 BCL2L1Q07817 233 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 RALGDSQ12967 914 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 OGFOD3Q6PK18 319 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 USP53Q70EK8 1073 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 TP53INP2Q8IXH6 220 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 ARFGAP1Q8N6T3 406 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 TMEM74Q96NL1 305 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 TUBGCP5Q96RT8 1024 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 KCTD15Q96SI1 283 aaPredicted RBP20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 CINPQ9BW66 212 aaPredicted RBP20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 LMBRD1Q9NUN5 540 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 AP4E1Q9UPM8 1137 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 LOXL2Q9Y4K0 774 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 DGKBQ9Y6T7 804 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 TENM4Q6N022 2769 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 PIEZO2Q9H5I5 2752 aa20.2■□□□□ 0.82
CLPTM1-204ENST00000585961 LGALS16A8MUM7 142 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ATMINO43313 823 aaPredicted RBP20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ELFN1P0C7U0 828 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 GLB1P16278 677 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 SERPINA4P29622 427 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ETV5P41161 510 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 MLLT3P42568 568 aaPredicted RBP20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 MAPK10P53779 464 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 AIF1P55008 147 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 MAMLD1Q13495 774 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ARHGEF7Q14155 803 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ACOX1Q15067 660 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ERMARDQ5T6L9 678 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 DENND2CQ68D51 928 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 TMPRSS9Q7Z410 1059 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 ZFAND4Q86XD8 727 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 OR6C4Q8NGE1 309 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 USP7Q93009 1102 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 PEBP4Q96S96 227 aa20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 LIMA1Q9UHB6 759 aaKnown RBP20.19■□□□□ 0.82
CLPTM1-204ENST00000585961 SLC28A2O43868 658 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 GM2AP17900 193 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 ERCC2P18074 760 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 CSNK1DP48730 415 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 ZFP36L1Q07352 338 aaKnown RBP20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 NFATC3Q12968 1075 aa20.18■□□□□ 0.82
CLPTM1-204ENST00000585961 AGERQ15109 404 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms