RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 PLXNB3Q9ULL4 1909 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 LMO7DNF2Z398 122 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 K7ESM1 405 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PSMD11O00231 422 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PDE2AO00408 941 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CD48P09326 243 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ELFN1P0C7U0 828 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ITIH2P19823 946 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CA4P22748 312 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 KELP23276 732 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 RPIAP49247 311 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 HADHBP55084 474 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 TAS2R40P59535 323 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 DAB2P98082 770 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 PPARDQ03181 441 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 RALGDSQ12967 914 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 EIF2B5Q13144 721 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MMRN1Q13201 1228 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 DNAJC3Q13217 504 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MESDQ14696 234 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 NFATC4Q14934 902 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 IRF4Q15306 451 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 LVRNQ6Q4G3 990 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 DHRS13Q6UX07 377 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 LIPIQ6XZB0 460 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZSWIM9Q86XI8 627 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 FSTL5Q8N475 847 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 GLMNQ92990 594 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 HDAC11Q96DB2 347 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 SCRN2Q96FV2 425 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZNF830Q96NB3 372 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 RNF157Q96PX1 679 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 BRD8Q9H0E9 1235 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 CCDC86Q9H6F5 360 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 NOD2Q9HC29 1040 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 MBNL1Q9NR56 388 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 APOBEC3BQ9UH17 382 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 ZMIZ1Q9ULJ6 1067 aa12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 GOLGA4Q13439 2230 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-222ENST00000581708 TNFRSF10CO14798 259 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 MFSD11O43934 449 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 RASGRP1O95267 797 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 PGLSO95336 258 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 LCA5LO95447 670 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CPP00450 1065 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ALPIP09923 528 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CYP2A6P11509 494 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 JUPP14923 745 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 KDELR1P24390 212 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 TRIM23P36406 574 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 KIAA1024LP59773 190 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 RPL26P61254 145 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 INPP5AQ14642 412 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ELOCQ15369 112 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ATP13A4Q4VNC1 1196 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ARMC12Q5T9G4 340 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 USP45Q70EL2 814 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 PROSER1Q86XN7 944 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 RHOT1Q8IXI2 618 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 PHACTR4Q8IZ21 702 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 PGBD5Q8N414 524 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 TPCN2Q8NHX9 752 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 SCG3Q8WXD2 468 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 GRAMD1AQ96CP6 724 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 MCCC1Q96RQ3 725 aaPredicted RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 IL12RB2Q99665 862 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 APOOQ9BUR5 198 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 SPTLC3Q9NUV7 552 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 DDX56Q9NY93 547 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 RPL26L1Q9UNX3 145 aaKnown RBP12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 DGKBQ9Y6T7 804 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ACACAQ13085 2346 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 TDRD6O60522 2096 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CACNB4O00305 520 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 FFAR2O15552 330 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 FZD6O60353 706 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CCNB1P14635 433 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 TEAD1P28347 426 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 VIPR1P32241 457 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 GJC1P36383 396 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 HK3P52790 923 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CCDC157Q569K6 752 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ZNF542PQ5EBM4 170 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 TPRG1LQ5T0D9 272 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ZFYVE27Q5T4F4 411 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 FAXCQ5TGI0 409 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 SLC9A4Q6AI14 798 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 ESRP1Q6NXG1 681 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 BZW1Q7L1Q6 419 aaKnown RBP12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 NLRP8Q86W28 1048 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 CBARPQ8N350 705 aaPredicted RBP12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 PQLC3Q8N755 202 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 DCBLD1Q8N8Z6 715 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 TC2NQ8N9U0 490 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 WDR48Q8TAF3 677 aa12.63□□□□□ -0.39
CDK5RAP3-222ENST00000581708 LMX1AQ8TE12 382 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms