RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 IGLV5-52A0A0A0MRZ9 124 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 WNT9BO14905 357 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 ZIC3O60481 467 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 RTN3O95197 1032 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 PAPSS2O95340 614 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 PLA2G2AP14555 144 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 CCR9P51686 369 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 SORDQ00796 357 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 BNC1Q01954 994 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 MMEL1Q495T6 779 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 LINGO2Q7L985 606 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 ZC3HC1Q86WB0 502 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC35F3Q8IY50 421 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 ZBTB2Q8N680 514 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 AGBL3Q8NEM8 1001 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 KCNG4Q8TDN1 519 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 NUDCD2Q8WVJ2 157 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 WASF1Q92558 559 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 TM6SF1Q9BZW5 370 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 TKTL2Q9H0I9 626 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 OCIAD1Q9NX40 245 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 FBXO9Q9UK97 447 aaPredicted RBP4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 INTS6Q9UL03 887 aaKnown RBP4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 CDC14AQ9UNH5 594 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 UTYO14607 1347 aa4.65□□□□□ -1.67
SMCHD1-204ENST00000581226 A0A0U1RQJ8 604 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 hDV102S1A0JD36 115 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 EIF3CLB5ME19 914 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 PROB1E7EW31 1015 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 MBD4O95243 580 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 FCGR1AP12314 374 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 ZNF12P17014 697 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 CDAP32320 146 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 STX2P32856 288 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 PDLIM4P50479 330 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 RARSP54136 660 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 DDR1Q08345 913 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 DCTN2Q13561 401 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 TSTQ16762 297 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 XKR9Q5GH70 373 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 KIAA1161Q6NSJ0 714 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 CDC73Q6P1J9 531 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 B3GNT6Q6ZMB0 384 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 DIS3L2Q8IYB7 885 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 HUS1BQ8NHY5 278 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 GTF3C6Q969F1 213 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 MPP4Q96JB8 637 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 MEIS3Q99687 375 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 PIP5K1AQ99755 562 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 RANBP17Q9H2T7 1088 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 SELENONQ9NZV5 590 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC9A2Q9UBY0 812 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 HAO1Q9UJM8 370 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 RCOR1Q9UKL0 485 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 MKLN1Q9UL63 735 aa4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 AAR2Q9Y312 384 aaKnown RBP4.64□□□□□ -1.67
SMCHD1-204ENST00000581226 CACNA1IQ9P0X4 2223 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 TMEM202A6NGA9 273 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 NPIPB15A6NHN6 443 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 B4E171 279 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 IKBKBO14920 756 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 TGFB1I1O43294 461 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 SEC14L2O76054 403 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 TBX18O95935 607 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 CD4P01730 458 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 HOXB5P09067 269 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 SPARCP09486 303 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 G6PDP11413 515 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 HNRNPH1P31943 449 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 ICAM3P32942 547 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 TSPAN7P41732 249 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 RPL7AP62424 266 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 NAE1Q13564 534 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 DHX34Q14147 1143 aaKnown RBP4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 FGFBP1Q14512 234 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 COL28A1Q2UY09 1125 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 NADSYN1Q6IA69 706 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 ANKRD54Q6NXT1 300 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 CREB3L2Q70SY1 520 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 MTSS1LQ765P7 747 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 GSTA5Q7RTV2 222 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 CPLX4Q7Z7G2 160 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 PGBD5Q8N414 524 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 ETNPPLQ8TBG4 499 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 ADAMTS15Q8TE58 950 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 SLITRK1Q96PX8 696 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 FIZ1Q96SL8 496 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 MKKSQ9NPJ1 570 aaPredicted RBP4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 GPR108Q9NPR9 543 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 SLC6A13Q9NSD5 602 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 ZNF69Q9UC07 566 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 SNX9Q9Y5X1 595 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 STON1Q9Y6Q2 735 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 CAPN7Q9Y6W3 813 aa4.63□□□□□ -1.67
SMCHD1-204ENST00000581226 GTPBP1O00178 669 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 TMEM63AO94886 807 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 CYC1P08574 325 aa4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 HSPA1AP0DMV8 641 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-204ENST00000581226 HSPA1BP0DMV9 641 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms