RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 C6P13671 934 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 CD59P13987 128 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 CCT8P50990 548 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 SEMG2Q02383 582 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 NIPAL4Q0D2K0 466 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 ARMC12Q5T9G4 340 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 KYAT3Q6YP21 454 aaKnown RBP22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 B4GALNT4Q76KP1 1039 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 DPPA4Q7L190 304 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 CNTD1Q8N815 330 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 TFB1MQ8WVM0 346 aaKnown RBP22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 HAUS1Q96CS2 278 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 KLF6Q99612 283 aaPredicted RBP22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 C1QTNF7Q9BXJ2 289 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 PHTF1Q9UMS5 762 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 PACSIN2Q9UNF0 486 aaPredicted RBP22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 LRRK1Q38SD2 2015 aa22.31■■□□□ 1.16
SMARCD2-206ENST00000577990 CFAP69A5D8W1 941 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 A6NNZ2 444 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 APOC4-APOC2K7ER74 178 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 FPGTO14772 594 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 APOC2P02655 101 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 CEACAM1P13688 526 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 NFKBIAP25963 317 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 LIG3P49916 1009 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 FOXC1Q12948 553 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 RALGDSQ12967 914 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 CCDC181Q5TID7 509 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 PTAR1Q7Z6K3 402 aaPredicted RBP22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 SPATS2Q86XZ4 545 aaKnown RBP22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 OR13H1Q8NG92 308 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 BMFQ96LC9 184 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 ELF4Q99607 663 aaPredicted RBP22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 HERPUD2Q9BSE4 406 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 CEP41Q9BYV8 373 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 ERVMER34-1Q9H9K5 563 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 B4GALT6Q9UBX8 382 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 COQ6Q9Y2Z9 468 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 PCDHGB2Q9Y5G2 931 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 SPEGQ15772 3267 aa22.3■■□□□ 1.16
SMARCD2-206ENST00000577990 A0A1B0GTQ1 180 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 DDX3YO15523 660 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 PYGMP11217 842 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 CA4P22748 312 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 IHHQ14623 411 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 AADACL2Q6P093 401 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 ZNF662Q6ZS27 426 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 PIP4P1Q86T03 277 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 ZC3H18Q86VM9 953 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 OXR1Q8N573 874 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 CENPTQ96BT3 561 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 TDRD1Q9BXT4 1180 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 ASPMQ8IZT6 3477 aa22.29■■□□□ 1.16
SMARCD2-206ENST00000577990 POM121BA6NF01 834 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 HACD1B0YJ81 288 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 LZTS3O60299 673 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 FZD6O60353 706 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 TOP3BO95985 862 aaKnown RBP22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 ELFN1P0C7U0 828 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 SPINK2P20155 84 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 PTPN3P26045 913 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 VIPR1P32241 457 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 CD86P42081 329 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 NOMO1Q15155 1222 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 PRAMEF14Q5SWL7 426 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 LIPIQ6XZB0 460 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 Q6ZSR6 202 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 TP53I13Q8NBR0 393 aaPredicted RBP22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 PIH1D2Q8WWB5 315 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 HES6Q96HZ4 224 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 AGAP3Q96P47 875 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 QKIQ96PU8 341 aaKnown RBP eCLIP22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 SLC32A1Q9H598 525 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 LZTFL1Q9NQ48 299 aa22.28■■□□□ 1.16
SMARCD2-206ENST00000577990 SPAARA0A1B0GVQ0 90 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 YKT6O15498 198 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 MTSS1O43312 755 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 TJP3O95049 919 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 MMP2P08253 660 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 PDHA1P08559 390 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 CYP2A6P11509 494 aaPredicted RBP22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 IGFALSP35858 605 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 RABIFP47224 123 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 ARRB1P49407 418 aaPredicted RBP22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 SHC2P98077 582 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 IL9RQ01113 521 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 ZNF211Q13398 564 aaPredicted RBP22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 XRCC4Q13426 336 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 SUZ12Q15022 739 aaKnown RBP22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 TEX44Q53QW1 395 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 FAM182AQ5T1J6 154 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 USP45Q70EL2 814 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 DCP2Q8IU60 420 aaKnown RBP22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 NDUFAF2Q8N183 169 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 SLC22A18ASQ8N1D0 253 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 UBE2Q2Q8WVN8 375 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 MCCC1Q96RQ3 725 aaPredicted RBP22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 GPR27Q9NS67 375 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 CHKBQ9Y259 395 aa22.27■■□□□ 1.16
SMARCD2-206ENST00000577990 PPIL1Q9Y3C6 166 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms