RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DHRS4L1P0CG22 281 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 STMN1P16949 149 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PMLP29590 882 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 VIPR2P41587 438 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 BCL2L1Q07817 233 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PITRM1Q5JRX3 1037 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PRSS36Q5K4E3 855 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 TRIM68Q6AZZ1 485 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 PDE12Q6L8Q7 609 aaKnown RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 NCEH1Q6PIU2 408 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 RTL10Q7L3V2 364 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 OTOAQ7RTW8 1153 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 SRLQ86TD4 932 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 C2CD4AQ8NCU7 369 aaPredicted RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 MDGA1Q8NFP4 955 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 OR4K2Q8NGD2 314 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 E2F7Q96AV8 911 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 FAM136AQ96C01 138 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 SCYL1Q96KG9 808 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 TRIB3Q96RU7 358 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 SPHK2Q9NRA0 654 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 KLHL14Q9P2G3 628 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 CPSF2Q9P2I0 782 aaKnown RBP7.1□□□□□ -1.27
SMG1-215ENST00000568239 MSRAQ9UJ68 235 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 DCTN4Q9UJW0 460 aa7.1□□□□□ -1.27
SMG1-215ENST00000568239 CCDC162PA2VCL2 907 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 MPOP05164 745 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 NSUN2Q08J23 767 aaKnown RBP eCLIP7.09□□□□□ -1.27
SMG1-215ENST00000568239 LAMB3Q13751 1172 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 FASTKD1Q53R41 847 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 RARS2Q5T160 578 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 RBM20Q5T481 1227 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 ARMC12Q5T9G4 340 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 CGB2Q6NT52 195 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 KYAT3Q6YP21 454 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 EP400NLQ6ZTU2 488 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 CCDC121Q6ZUS5 278 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 CILP2Q8IUL8 1156 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 SPNS2Q8IVW8 549 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 CNTN4Q8IWV2 1026 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 STYXQ8WUJ0 223 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 GPR22Q99680 433 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 MARCH4Q9P2E8 410 aaPredicted RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 TBC1D14Q9P2M4 693 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 HELZP42694 1942 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 A0A0G2JND7 137 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 UBA6A0AVT1 1052 aaPredicted RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 STX7O15400 261 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 CD3EAPO15446 510 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 SLC7A4O43246 635 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 PLIN3O60664 434 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 RPP40O75818 363 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 IGSF6O95976 241 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 ALPIP09923 528 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 PRSS56P0CW18 603 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 KITP10721 976 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 PABPC1P11940 636 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 BMP1P13497 986 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 RAB10P61026 200 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 SEMG2Q02383 582 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 ZNF77Q15935 545 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 FUT11Q495W5 492 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 DGKKQ5KSL6 1271 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 ASTLQ6HA08 431 aaPredicted RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 MRNIPQ6NTE8 343 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 GET4Q7L5D6 327 aaPredicted RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 SPATS2Q86XZ4 545 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 CEP97Q8IW35 865 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 ADGRG2Q8IZP9 1017 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 OR4L1Q8NH43 312 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 GRAMD1AQ96CP6 724 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 CDKN2AIPNLQ96HQ2 116 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 ZFYVE19Q96K21 471 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 GPR63Q9BZJ6 419 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 CIPCQ9C0C6 399 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 MFSD1Q9H3U5 465 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 ZNF395Q9H8N7 513 aaPredicted RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 MKS1Q9NXB0 559 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 MARCOQ9UEW3 520 aaPredicted RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 SLCO3A1Q9UIG8 710 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 SLC25A13Q9UJS0 675 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 GGA2Q9UJY4 613 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 EMCNQ9ULC0 261 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 RUVBL2Q9Y230 463 aaKnown RBP7.09□□□□□ -1.27
SMG1-215ENST00000568239 ACOT9Q9Y305 439 aa7.09□□□□□ -1.27
SMG1-215ENST00000568239 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 STK25O00506 426 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 BPGMP07738 259 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TROVE2P10155 538 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMG1-215ENST00000568239 LPOP22079 712 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 HADHAP40939 763 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TAS2R39P59534 338 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SNRPD1P62314 119 aaKnown RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 BST1Q10588 318 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 SLC12A1Q13621 1099 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 TAF1AQ15573 450 aaPredicted RBP7.08□□□□□ -1.28
SMG1-215ENST00000568239 ATG16L1Q676U5 607 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 RGS9BPQ6ZS82 235 aa7.08□□□□□ -1.28
SMG1-215ENST00000568239 KIAA0408Q6ZU52 694 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms