RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 TUBE1Q9UJT0 475 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 CHIC2Q9UKJ5 165 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 SAMM50Q9Y512 469 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 OTOFQ9HC10 1997 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 HECW1Q76N89 1606 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 MTCL1Q9Y4B5 1905 aaKnown RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 GCC2Q8IWJ2 1684 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 RAB19A4D1S5 217 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 GOLGA8BA8MQT2 603 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 NT5C1B-RDH14C9J2C7 533 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 H0YJX3 145 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 TXNDC9O14530 226 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 SLC31A2O15432 143 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 RHBDL1O75783 438 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 BCAS2O75934 225 aaPredicted RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 GH2P01242 217 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 FBP1P09467 338 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 OR4E1P0C645 316 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ZNF12P17014 697 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 TLX1P31314 330 aaPredicted RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 RRM2P31350 389 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 GPD2P43304 727 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 LEPRP48357 1165 aaKnown RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 DNM2P50570 870 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 HAND2P61296 217 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ERVS71-1P61550 626 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 NAA20P61599 178 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ATP2C1P98194 919 aaPredicted RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 SEMA5AQ13591 1074 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 APOFQ13790 326 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 FAM110CQ1W6H9 321 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ETV3LQ6ZN32 361 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 VN1R5Q7Z5H4 357 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 FGD2Q7Z6J4 655 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 LINC00523Q86TU6 105 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 NAGSQ8N159 534 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 OR2T34Q8NGX1 318 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 PCDH19Q8TAB3 1148 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 NELFBQ8WX92 580 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ZNF486Q96H40 463 aaPredicted RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 TRIB1Q96RU8 372 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 CDADC1Q9BWV3 514 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 SLC19A3Q9BZV2 496 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 MKRN2Q9H000 416 aaKnown RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 TOLLIPQ9H0E2 274 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 OR51V1Q9H2C8 321 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 SLC6A15Q9H2J7 730 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 TP63Q9H3D4 680 aaPredicted RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ESF1Q9H501 851 aaKnown RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 FOLH1BQ9HBA9 442 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 FAM105AQ9NUU6 356 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 TRNAU1APQ9NX07 287 aaKnown RBP3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ADPRHL2Q9NX46 363 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 ZDHHC7Q9NXF8 308 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 DLGAP2Q9P1A6 1054 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 SMPXQ9UHP9 88 aa3.92□□□□□ -1.78
LRFN5-204ENST00000554171 RAPGEF6Q8TEU7 1601 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 UHRF1BP1Q6BDS2 1440 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 RTL9Q8NET4 1388 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 TMEM120BA0PK00 339 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 KRT87PA6NCN2 255 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 SMIM23A6NLE4 172 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 TRPC5OSA6NMA1 111 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 PROB1E7EW31 1015 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 H3BM21 787 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 RNF103O00237 685 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 CTDSP2O14595 271 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 KIAA0355O15063 1070 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 DFNA5O60443 496 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 CLPXO76031 633 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 FTCDO95954 541 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 DHRS4L1P0CG22 281 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 RPA1P27694 616 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 GATA4P43694 442 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 CCT3P49368 545 aaKnown RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 PCYT1AP49585 367 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 TMED10P49755 219 aaKnown RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 CTBSQ01459 385 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 SOX4Q06945 474 aaPredicted RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 PRKD1Q15139 912 aaPredicted RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 KLHL26Q53HC5 615 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 TDRD12Q587J7 1177 aaKnown RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 ZRANB3Q5FWF4 1079 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 MTFR2Q6P444 385 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 TMIGD1Q6UXZ0 262 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 SLC36A4Q6YBV0 504 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 PIGWQ7Z7B1 504 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 MTDHQ86UE4 582 aaKnown RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 LHFPL3Q86UP9 236 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 WDR5BQ86VZ2 330 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 NUDT13Q86X67 352 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 TRIM59Q8IWR1 403 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 ZSCAN29Q8IWY8 852 aaPredicted RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 CMTR2Q8IYT2 770 aaKnown RBP3.91□□□□□ -1.78
LRFN5-204ENST00000554171 ENTHD1Q8IYW4 607 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 FAM109AQ8N4B1 249 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 OR4M1Q8NGD0 313 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 SPATA20Q8TB22 786 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 PAQR8Q8TEZ7 354 aa3.91□□□□□ -1.78
LRFN5-204ENST00000554171 KLC2Q9H0B6 622 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms