RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 ATXN7L1Q9ULK2 861 aaPredicted RBP9.44□□□□□ -0.9
CHD8-203ENST00000553283 COL27A1Q8IZC6 1860 aaPredicted RBP9.44□□□□□ -0.9
CHD8-203ENST00000553283 SPTA1P02549 2419 aa9.44□□□□□ -0.9
CHD8-203ENST00000553283 TMEM202A6NGA9 273 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 ARHGAP42A6NI28 874 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 LRRC10BA6NIK2 292 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 CACNB4O00305 520 aaPredicted RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 TNFRSF10CO14798 259 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 NVLO15381 856 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 NOBOXO60393 691 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 PALMO75781 387 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 RECQL5O94762 991 aaPredicted RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 PRKCGP05129 697 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 PCCBP05166 539 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 HOXC4P09017 264 aaPredicted RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 HGFP14210 728 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 PNLIPP16233 465 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 GLB1P16278 677 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 KELP23276 732 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 SERPINA4P29622 427 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 TRIM23P36406 574 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 RGRP47804 291 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 PAPOLAP51003 745 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 COPB1P53618 953 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 KIAA1024LP59773 190 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 TPI1P60174 286 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 POLR2LP62875 67 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 OGDHQ02218 1023 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 ZFP36L1Q07352 338 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 NSUN2Q08J23 767 aaKnown RBP eCLIP9.43□□□□□ -0.9
CHD8-203ENST00000553283 CERCAMQ5T4B2 595 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 AFMIDQ63HM1 303 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 ACAD10Q6JQN1 1059 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 DCUN1D2Q6PH85 259 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 TAF8Q7Z7C8 310 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 JAMLQ86YT9 394 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 CCNJLQ8IV13 435 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 MCOLN2Q8IZK6 566 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 Q8N9G6 341 aaPredicted RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 FAM46DQ8NEK8 389 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 NEK11Q8NG66 645 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 OR56A4Q8NGH8 313 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 OR1E3Q8WZA6 343 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 FUBP1Q96AE4 644 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 ECHDC3Q96DC8 303 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 PDXPQ96GD0 296 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 CELF6Q96J87 481 aaKnown RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
CHD8-203ENST00000553283 SLC39A8Q9C0K1 460 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 ATP13A3Q9H7F0 1226 aa9.43□□□□□ -0.9
CHD8-203ENST00000553283 MYO18BQ8IUG5 2567 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 LGALS16A8MUM7 142 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 EIF3CLB5ME19 914 aaKnown RBP9.42□□□□□ -0.9
CHD8-203ENST00000553283 JMJD7P0C870 316 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 DESP17661 470 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 UBXN1Q04323 297 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 BCL2L1Q07817 233 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 RALGDSQ12967 914 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 MAMLD1Q13495 774 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 RFTN1Q14699 578 aaPredicted RBP9.42□□□□□ -0.9
CHD8-203ENST00000553283 TGIF1Q15583 401 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 ERMARDQ5T6L9 678 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 XKR5Q6UX68 686 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 LIPIQ6XZB0 460 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 USP53Q70EK8 1073 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 DPPA4Q7L190 304 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 SFTPA2Q8IWL1 248 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
CHD8-203ENST00000553283 ANKRD20A12PQ8NF67 263 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 TMEM159Q96B96 161 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 ERGIC2Q96RQ1 377 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 EIF3CQ99613 913 aaKnown RBP9.42□□□□□ -0.9
CHD8-203ENST00000553283 FGF22Q9HCT0 170 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 GPATCH2LQ9NWQ4 482 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 LRIT1Q9P2V4 623 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 PISDQ9UG56 409 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 LIMA1Q9UHB6 759 aaKnown RBP9.42□□□□□ -0.9
CHD8-203ENST00000553283 AP4E1Q9UPM8 1137 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 LOXL2Q9Y4K0 774 aa9.42□□□□□ -0.9
CHD8-203ENST00000553283 UNC13CQ8NB66 2214 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 MAST4O15021 2626 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 PDE2AO00408 941 aaPredicted RBP9.41□□□□□ -0.9
CHD8-203ENST00000553283 EEF2KO00418 725 aaKnown RBP9.41□□□□□ -0.9
CHD8-203ENST00000553283 TRAFD1O14545 582 aaPredicted RBP9.41□□□□□ -0.9
CHD8-203ENST00000553283 DAPK3O43293 454 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 NUDT21O43809 227 aaKnown RBP9.41□□□□□ -0.9
CHD8-203ENST00000553283 ELFN1P0C7U0 828 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 CCDC172P0C7W6 258 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 LIPCP11150 499 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 FERP16591 822 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 GM2AP17900 193 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 ERCC2P18074 760 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 PSMA2P25787 234 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 SCNN1BP51168 640 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 IL10RBQ08334 325 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 ARHGEF7Q14155 803 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 HLTFQ14527 1009 aaKnown RBP eCLIP9.41□□□□□ -0.9
CHD8-203ENST00000553283 CA9Q16790 459 aa9.41□□□□□ -0.9
CHD8-203ENST00000553283 LINC00303Q3SY05 128 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms