RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 GRM3Q14832 879 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 PTPRRQ15256 657 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 GEN1Q17RS7 908 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 HHATQ5VTY9 493 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 C22orf39Q6P5X5 142 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 GLT6D1Q7Z4J2 308 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 LRRC34Q8IZ02 419 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 AHI1Q8N157 1196 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 ST13P5Q8NFI4 369 aaPredicted RBP19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 CALML6Q8TD86 181 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 PIH1D2Q8WWB5 315 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 ZFYVE19Q96K21 471 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 SUDS3Q9H7L9 328 aaPredicted RBP19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 OBP2AQ9NY56 170 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 SLC25A13Q9UJS0 675 aa19.64■□□□□ 0.73
RBFOX1-215ENST00000553186 TCP11X1B4DZS4 312 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 PIGNO95427 931 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 CISD3P0C7P0 127 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 ARSAP15289 507 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 TAC1P20366 129 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 PRAMEP78395 509 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 PDK4Q16654 411 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 PPM1JQ5JR12 505 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 ARMC12Q5T9G4 340 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 MBLAC2Q68D91 279 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 ZNF771Q7L3S4 317 aaPredicted RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 PTAR1Q7Z6K3 402 aaPredicted RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 C12orf40Q86WS4 652 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 CILP2Q8IUL8 1156 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 OR6P1Q8NGX9 317 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 ZNF473Q8WTR7 871 aaKnown RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 MYLIPQ8WY64 445 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 FAM83CQ9BQN1 747 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 CEP44Q9C0F1 390 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 CAB39LQ9H9S4 337 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 OR51F1A6NGY5 319 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 OTOL1A6NHN0 477 aaPredicted RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 TNRC18O15417 2968 aaPredicted RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 RPP40O75818 363 aaKnown RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 ADH1CP00326 375 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 SERPINB8P50452 374 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 SNRPD1P62314 119 aaKnown RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 TMPRSS15P98073 1019 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 BCL2L1Q07817 233 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 ADAM15Q13444 863 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 SEPT7Q16181 437 aaKnown RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 RGS9BPQ6ZS82 235 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 MFSD6LQ8IWD5 586 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 MYO19Q96H55 970 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 VPS11Q9H270 941 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 EBF3Q9H4W6 596 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 NLE1Q9NVX2 485 aaPredicted RBP19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 CLEC1BQ9P126 229 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 CDH7Q9ULB5 785 aa19.63■□□□□ 0.73
RBFOX1-215ENST00000553186 SOCS5O75159 536 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 HAUS5O94927 633 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 HOXB8P17481 243 aaPredicted RBP19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 HADHAP40939 763 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 ABL2P42684 1182 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 GRIA4P48058 902 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 DLG2Q15700 870 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 GALNT7Q86SF2 657 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 ETFBKMTQ8IXQ9 262 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 PCDH20Q8N6Y1 951 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 PNPLA1Q8N8W4 532 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 CDKN2AIPNLQ96HQ2 116 aa19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 IQCGQ9H095 443 aaKnown RBP19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 MARCH4Q9P2E8 410 aaPredicted RBP19.62■□□□□ 0.73
RBFOX1-215ENST00000553186 CCDC162PA2VCL2 907 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 GSRP00390 522 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 GOT2P00505 430 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 VIMP08670 466 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 LEPRP48357 1165 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 RPL26P61254 145 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 GAB4Q2WGN9 574 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 MYLK3Q32MK0 819 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 ZNF789Q5FWF6 425 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 TANGO2Q6ICL3 276 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 LMNTD2Q8IXW0 634 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 TTC30BQ8N4P2 665 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 OR4K2Q8NGD2 314 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 MRGPRX3Q96LB0 322 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 ATP13A3Q9H7F0 1226 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 RPL26L1Q9UNX3 145 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 C2orf81A6NN90 581 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 POLR2EP19388 210 aaKnown RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 GMPRP36959 345 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 CD151P48509 253 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 DGKGP49619 791 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 SORCS1Q8WY21 1168 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 S1PR5Q9H228 398 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 ZNF576Q9H609 170 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 MAGEE1Q9HCI5 957 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 FBXO6Q9NRD1 293 aaPredicted RBP19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 SLC39A10Q9ULF5 831 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 ERVW-1Q9UQF0 538 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 SLC27A6Q9Y2P4 619 aa19.61■□□□□ 0.73
RBFOX1-215ENST00000553186 ANKRD36A6QL64 1941 aa19.6■□□□□ 0.73
RBFOX1-215ENST00000553186 A0A0U1RQS6 177 aa19.6■□□□□ 0.73
RBFOX1-215ENST00000553186 ERICH4A6NGS2 130 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms