RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 KDM4CQ9H3R0 1056 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 EVLQ9UI08 416 aaPredicted RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 DCTN4Q9UJW0 460 aa22.54■■□□□ 1.2
HOMER3-204ENST00000539827 LAMA2P24043 3122 aaKnown RBP22.54■■□□□ 1.2
HOMER3-204ENST00000539827 FGF3P11487 239 aaPredicted RBP22.53■■□□□ 1.2
HOMER3-204ENST00000539827 STMN1P16949 149 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 POLD2P49005 469 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 RAB10P61026 200 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 ERVK-21P61565 698 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 STX3Q13277 289 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 SLC12A1Q13621 1099 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 CBX2Q14781 532 aaPredicted RBP22.53■■□□□ 1.2
HOMER3-204ENST00000539827 MBLAC2Q68D91 279 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 ASTLQ6HA08 431 aaPredicted RBP22.53■■□□□ 1.2
HOMER3-204ENST00000539827 OMDQ99983 421 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 PLCD4Q9BRC7 762 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 ADGRE3Q9BY15 652 aa22.53■■□□□ 1.2
HOMER3-204ENST00000539827 RUVBL2Q9Y230 463 aaKnown RBP22.53■■□□□ 1.2
HOMER3-204ENST00000539827 ANKRD66B4E2M5 251 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 NEDD8-MDP1E9PL57 170 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 DNAJC6O75061 913 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 GLP2RO95838 553 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 S1PR4O95977 384 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 CPA3P15088 417 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PBX2P40425 430 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 ZNF140P52738 457 aaPredicted RBP22.52■■□□□ 1.2
HOMER3-204ENST00000539827 TAF1AQ15573 450 aaPredicted RBP22.52■■□□□ 1.2
HOMER3-204ENST00000539827 ZNF77Q15935 545 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PITRM1Q5JRX3 1037 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 OR4K2Q8NGD2 314 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 CDKN2AIPNLQ96HQ2 116 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 RPL10LQ96L21 214 aaKnown RBP22.52■■□□□ 1.2
HOMER3-204ENST00000539827 TNKS2Q9H2K2 1166 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 NLE1Q9NVX2 485 aaPredicted RBP22.52■■□□□ 1.2
HOMER3-204ENST00000539827 ZDHHC7Q9NXF8 308 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 COPG2Q9UBF2 871 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 RIMKLBQ9ULI2 386 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 USH1CQ9Y6N9 552 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 A0A0U1RQS6 177 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 MYO1CO00159 1063 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 CD3EAPO15446 510 aaKnown RBP22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PRSS56P0CW18 603 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 HLA-FP30511 346 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 SLC12A2P55011 1212 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 SEMA3AQ14563 771 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PDE12Q6L8Q7 609 aaKnown RBP22.52■■□□□ 1.2
HOMER3-204ENST00000539827 RAB3IL1Q8TBN0 382 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PEX13Q92968 403 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 TSNARE1Q96NA8 513 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 SAMD11Q96NU1 681 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 TRIM55Q9BYV6 548 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 C20orf27Q9GZN8 174 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PIDD1Q9HB75 910 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 NMRAL1Q9HBL8 299 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 ACOT9Q9Y305 439 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 PCDHB9Q9Y5E1 797 aa22.52■■□□□ 1.2
HOMER3-204ENST00000539827 IL1BP01584 269 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 GKP32189 559 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 STK19P49842 368 aaPredicted RBP22.51■■□□□ 1.19
HOMER3-204ENST00000539827 CLCN5P51795 746 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 PLK1P53350 603 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 OCRLQ01968 901 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 DBN1Q16643 649 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 CAMK1DQ8IU85 385 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 ARID3BQ8IVW6 561 aaPredicted RBP22.51■■□□□ 1.19
HOMER3-204ENST00000539827 SPATA6LQ8N4H0 392 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 OR4L1Q8NH43 312 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 ITFG1Q8TB96 612 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 SCYL1Q96KG9 808 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 OLFM1Q99784 485 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 BBS2Q9BXC9 721 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 MRPS23Q9Y3D9 190 aaKnown RBP22.51■■□□□ 1.19
HOMER3-204ENST00000539827 WNT6Q9Y6F9 365 aa22.51■■□□□ 1.19
HOMER3-204ENST00000539827 C2orf81A6NN90 581 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 PIGNO95427 931 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 CRABP2P29373 138 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 MAGEA10P43363 369 aaPredicted RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 GLRBP48167 497 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 AP1S1P61966 158 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 POU4F1Q01851 419 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 DLG1Q12959 904 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 LACTB2Q53H82 288 aaPredicted RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 LMNTD2Q8IXW0 634 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 CENPLQ8N0S6 344 aaPredicted RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 FITM2Q8N6M3 262 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 IRF7Q92985 503 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 NXNL1Q96CM4 212 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 UNKQ9C0B0 810 aaKnown RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 CATSPERZQ9NTU4 200 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 CPSF2Q9P2I0 782 aaKnown RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 G3V2L1 256 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 ZNF197O14709 1029 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 ITM2AO43736 263 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 FZD6O60353 706 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 SNNO75324 88 aaPredicted RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 LYPLA1O75608 230 aaPredicted RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 UBOX5O94941 541 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 PENKP01210 267 aaPredicted RBP22.5■■□□□ 1.19
HOMER3-204ENST00000539827 BMP1P13497 986 aa22.5■■□□□ 1.19
HOMER3-204ENST00000539827 CTPS1P17812 591 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms