RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SGCGQ13326 291 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 PIGHQ14442 188 aaPredicted RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 FAXCQ5TGI0 409 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 MANEALQ5VSG8 457 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 RWDD4Q6NW29 188 aaKnown RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 RD3Q7Z3Z2 195 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 CLEC14AQ86T13 490 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 Q8N9G6 341 aaPredicted RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 ZNF564Q8TBZ8 553 aaPredicted RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 JPH3Q8WXH2 748 aaPredicted RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 TBC1D31Q96DN5 1066 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 ARHGEF26Q96DR7 871 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 KLHL32Q96NJ5 620 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 CCNL2Q96S94 520 aaPredicted RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 EIF3CQ99613 913 aaKnown RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 EPAS1Q99814 870 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 TRIM7Q9C029 511 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 USP29Q9HBJ7 922 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 SPTLC3Q9NUV7 552 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
USB1-203ENST00000539737 CTTNBP2NLQ9P2B4 639 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 SPASTQ9UBP0 616 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 PISDQ9UG56 409 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 IP6K2Q9UHH9 426 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 SALL4Q9UJQ4 1053 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 FZD10Q9ULW2 581 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 PADI4Q9UM07 663 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 LRP4O75096 1905 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 NBASA2RRP1 2371 aa15.09■□□□□ 0.01
USB1-203ENST00000539737 UNC13CQ8NB66 2214 aa15.08■□□□□ 0
USB1-203ENST00000539737 ANKRD36A6QL64 1941 aa15.08■□□□□ 0
USB1-203ENST00000539737 ZFC3H1O60293 1989 aaKnown RBP15.08■□□□□ 0
USB1-203ENST00000539737 CCDC187A0A096LP49 1063 aa15.08■□□□□ 0
USB1-203ENST00000539737 FAM72CH0Y354 149 aa15.08■□□□□ 0
USB1-203ENST00000539737 INSIG1O15503 277 aa15.08■□□□□ 0
USB1-203ENST00000539737 PRKCGP05129 697 aa15.08■□□□□ 0
USB1-203ENST00000539737 ANXA6P08133 673 aa15.08■□□□□ 0
USB1-203ENST00000539737 HTR7P34969 479 aa15.08■□□□□ 0
USB1-203ENST00000539737 UGT1A5P35504 534 aa15.08■□□□□ 0
USB1-203ENST00000539737 CYLC1P35663 651 aaPredicted RBP15.08■□□□□ 0
USB1-203ENST00000539737 THOP1P52888 689 aa15.08■□□□□ 0
USB1-203ENST00000539737 FAM72AQ5TYM5 149 aa15.08■□□□□ 0
USB1-203ENST00000539737 FAM72DQ6L9T8 149 aa15.08■□□□□ 0
USB1-203ENST00000539737 IGF2-ASQ6U949 168 aa15.08■□□□□ 0
USB1-203ENST00000539737 TMPRSS9Q7Z410 1059 aa15.08■□□□□ 0
USB1-203ENST00000539737 FAM72BQ86X60 149 aa15.08■□□□□ 0
USB1-203ENST00000539737 ZFAND4Q86XD8 727 aa15.08■□□□□ 0
USB1-203ENST00000539737 ZNF354CQ86Y25 554 aa15.08■□□□□ 0
USB1-203ENST00000539737 HID1Q8IV36 788 aa15.08■□□□□ 0
USB1-203ENST00000539737 PSTKQ8IV42 348 aaKnown RBP15.08■□□□□ 0
USB1-203ENST00000539737 ARL14Q8N4G2 192 aa15.08■□□□□ 0
USB1-203ENST00000539737 PCDH20Q8N6Y1 951 aaKnown RBP15.08■□□□□ 0
USB1-203ENST00000539737 NIPA2Q8N8Q9 360 aa15.08■□□□□ 0
USB1-203ENST00000539737 CENPTQ96BT3 561 aa15.08■□□□□ 0
USB1-203ENST00000539737 CPEB1Q9BZB8 566 aaKnown RBP15.08■□□□□ 0
USB1-203ENST00000539737 CEP44Q9C0F1 390 aa15.08■□□□□ 0
USB1-203ENST00000539737 KLC2Q9H0B6 622 aa15.08■□□□□ 0
USB1-203ENST00000539737 LUC7LQ9NQ29 371 aaKnown RBP15.08■□□□□ 0
USB1-203ENST00000539737 FOXJ2Q9P0K8 574 aa15.08■□□□□ 0
USB1-203ENST00000539737 DNAI1Q9UI46 699 aa15.08■□□□□ 0
USB1-203ENST00000539737 INTUQ9ULD6 942 aa15.08■□□□□ 0
USB1-203ENST00000539737 AP4E1Q9UPM8 1137 aa15.08■□□□□ 0
USB1-203ENST00000539737 CSNK1G3Q9Y6M4 447 aa15.08■□□□□ 0
USB1-203ENST00000539737 CHD5Q8TDI0 1954 aa15.07■□□□□ 0
USB1-203ENST00000539737 CAPN8A6NHC0 703 aa15.07■□□□□ 0
USB1-203ENST00000539737 LMO7DNF2Z398 122 aa15.07■□□□□ 0
USB1-203ENST00000539737 MYO1FO00160 1098 aa15.07■□□□□ 0
USB1-203ENST00000539737 NTN3O00634 580 aaPredicted RBP15.07■□□□□ 0
USB1-203ENST00000539737 PLD2O14939 933 aa15.07■□□□□ 0
USB1-203ENST00000539737 LRCH4O75427 683 aa15.07■□□□□ 0
USB1-203ENST00000539737 LRIG2O94898 1065 aa15.07■□□□□ 0
USB1-203ENST00000539737 RPLP0P05388 317 aaKnown RBP15.07■□□□□ 0
USB1-203ENST00000539737 ITGB6P18564 788 aa15.07■□□□□ 0
USB1-203ENST00000539737 FECHP22830 423 aa15.07■□□□□ 0
USB1-203ENST00000539737 MIPP30301 263 aa15.07■□□□□ 0
USB1-203ENST00000539737 MAPKAPK2P49137 400 aa15.07■□□□□ 0
USB1-203ENST00000539737 POLD3Q15054 466 aaPredicted RBP15.07■□□□□ 0
USB1-203ENST00000539737 IRF4Q15306 451 aa15.07■□□□□ 0
USB1-203ENST00000539737 ALG11Q2TAA5 492 aa15.07■□□□□ 0
USB1-203ENST00000539737 DCP2Q8IU60 420 aaKnown RBP15.07■□□□□ 0
USB1-203ENST00000539737 TMTC1Q8IUR5 882 aa15.07■□□□□ 0
USB1-203ENST00000539737 RHOT2Q8IXI1 618 aa15.07■□□□□ 0
USB1-203ENST00000539737 FBXO39Q8N4B4 442 aa15.07■□□□□ 0
USB1-203ENST00000539737 TP53I13Q8NBR0 393 aaPredicted RBP15.07■□□□□ 0
USB1-203ENST00000539737 HTR3CQ8WXA8 447 aa15.07■□□□□ 0
USB1-203ENST00000539737 PACSIN1Q9BY11 444 aa15.07■□□□□ 0
USB1-203ENST00000539737 FAM117AQ9C073 453 aa15.07■□□□□ 0
USB1-203ENST00000539737 EVA1BQ9NVM1 165 aa15.07■□□□□ 0
USB1-203ENST00000539737 IL17BQ9UHF5 180 aa15.07■□□□□ 0
USB1-203ENST00000539737 NBPF19A0A087WUL8 3843 aa15.06■□□□□ 0
USB1-203ENST00000539737 SPENQ96T58 3664 aaKnown RBP15.06■□□□□ 0
USB1-203ENST00000539737 PRAMEF33A0A0G2JMD5 474 aa15.06■□□□□ 0
USB1-203ENST00000539737 FGF10O15520 208 aaPredicted RBP15.06■□□□□ 0
USB1-203ENST00000539737 AP1G1O43747 822 aa15.06■□□□□ 0
USB1-203ENST00000539737 PRAMEF10O60809 474 aa15.06■□□□□ 0
USB1-203ENST00000539737 IPO7O95373 1038 aaKnown RBP15.06■□□□□ 0
USB1-203ENST00000539737 ITGA2BP08514 1039 aa15.06■□□□□ 0
USB1-203ENST00000539737 RHOQP17081 205 aa15.06■□□□□ 0
USB1-203ENST00000539737 ZNF135P52742 658 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms