RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 LRRC42Q9Y546 428 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 COPG1Q9Y678 874 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 MTMR11A4FU01 709 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 A8MT66 165 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 IQCF5A8MTL0 148 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 SNAP91O60641 907 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 NDUFS3O75489 264 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 SRP72O76094 671 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 SERPINF2P08697 491 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 TYMPP19971 482 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ATP5F1P24539 256 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 RGRP47804 291 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ALDH7A1P49419 539 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 AQP4P55087 323 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CCNIQ14094 377 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 TBCCQ15814 346 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 LRRC8DQ7L1W4 858 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 LSMEM2Q8N112 164 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 FBXW8Q8N3Y1 598 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 LRGUKQ96M69 825 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 UROC1Q96N76 676 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 TSGA13Q96PP4 275 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 PKMYT1Q99640 499 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 MRPL57Q9BQC6 102 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 C1QTNF1Q9BXJ1 281 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 POLR1EQ9GZS1 481 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 VCXQ9H320 206 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 SCML2Q9UQR0 700 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 TET1Q8NFU7 2136 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 A0A1W2PQ45 241 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 A0A1W2PQY0 241 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 RGSL1A5PLK6 1076 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 NR5A2O00482 541 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 UBDO15205 165 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CD3EAPO15446 510 aaKnown RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 PEX1O43933 1283 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 INHAP05111 366 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 APOA4P06727 396 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 LINC00032P0C843 101 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 RAP1GDS1P52306 607 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 OXCT1P55809 520 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 MAP3K21Q5TCX8 1036 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 CLEC14AQ86T13 490 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ERLEC1Q96DZ1 483 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 GBP5Q96PP8 586 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 MMADHCQ9H3L0 296 aaPredicted RBP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF212Q9UDV6 495 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 NEU3Q9UQ49 428 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 ANKRD6Q9Y2G4 727 aa8.74□□□□□ -1.01
UBE3B-208ENST00000538070 TMEM114B3SHH9 223 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 AP3B1O00203 1094 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 RHOCP08134 193 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 GKP32189 559 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 PPARGP37231 505 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 CDC16Q13042 620 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 BLMHQ13867 455 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 PTK2BQ14289 1009 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 FASTKQ14296 549 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 FUT11Q495W5 492 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 SFT2D3Q587I9 215 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 PAOXQ6QHF9 649 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 GLT6D1Q7Z4J2 308 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 RPAINQ86UA6 219 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 C2CD4AQ8NCU7 369 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ICA1LQ8NDH6 482 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 OR13J1Q8NGT2 312 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 CALML6Q8TD86 181 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 DIS3LQ8TF46 1054 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 TUBGCP3Q96CW5 907 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 IMP4Q96G21 291 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 MRPL1Q9BYD6 325 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 LRCH1Q9Y2L9 728 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 MYOCOSA0A1B0GUC4 107 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 H0Y626 953 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ENPP3O14638 875 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 PRRG1O14668 218 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 IPO13O94829 963 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ATP5C1P36542 298 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 KPNA2P52292 529 aaKnown RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 POU4F1Q01851 419 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 BTKQ06187 659 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 NRF1Q16656 503 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 STXBP5Q5T5C0 1151 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ATXN7L2Q5T6C5 722 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 RNF219Q5W0B1 726 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 KDELC1Q6UW63 502 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 DHDDSQ86SQ9 333 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 CILP2Q8IUL8 1156 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 BBS5Q8N3I7 341 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 AFAP1L2Q8N4X5 818 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 GABPB2Q8TAK5 448 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 SKA2Q8WVK7 121 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ECSITQ9BQ95 431 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.73□□□□□ -1.01
UBE3B-208ENST00000538070 MOXD2PA6NHM9 499 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 MAP3K13O43283 966 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 OR1I1O60431 355 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 KATNA1O75449 491 aa8.73□□□□□ -1.01
UBE3B-208ENST00000538070 IL1BP01584 269 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms