RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ELFN1P0C7U0 828 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 ARL4AP40617 200 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 SRP54P61011 504 aaKnown RBP21.02■□□□□ 0.96
SMPD1-204ENST00000530395 DPYSQ14117 519 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 C3orf38Q5JPI3 329 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 PERM1Q5SV97 790 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 TMCO4Q5TGY1 634 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 ARHGAP36Q6ZRI8 547 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 RD3Q7Z3Z2 195 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 GKN2Q86XP6 184 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 SPACA3Q8IXA5 215 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 ARL10Q8N8L6 244 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 ECHDC3Q96DC8 303 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 NAP1L5Q96NT1 182 aaPredicted RBP21.02■□□□□ 0.96
SMPD1-204ENST00000530395 PSKH2Q96QS6 385 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 CCDC3Q9BQI4 270 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 SYNDIG1Q9H7V2 258 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 GULP1Q9UBP9 304 aa21.02■□□□□ 0.96
SMPD1-204ENST00000530395 GCN1Q92616 2671 aaKnown RBP21.01■□□□□ 0.95
SMPD1-204ENST00000530395 CACNB4O00305 520 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-204ENST00000530395 CELA2BP08218 269 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-204ENST00000530395 SKILP12757 684 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 RBMS1P29558 406 aaKnown RBP21.01■□□□□ 0.95
SMPD1-204ENST00000530395 SCNN1BP51168 640 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 TPM4P67936 248 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 TLE3Q04726 772 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 SPIDRQ14159 915 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 ZNF235Q14590 738 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 LBRQ14739 615 aaKnown RBP21.01■□□□□ 0.95
SMPD1-204ENST00000530395 DPYSL2Q16555 572 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 BOLA3Q53S33 107 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 TDRD12Q587J7 1177 aaKnown RBP21.01■□□□□ 0.95
SMPD1-204ENST00000530395 FIGNQ5HY92 759 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 BROXQ5VW32 411 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 DPPA4Q7L190 304 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 PCDH19Q8TAB3 1148 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 ATXN7L3BQ96GX2 97 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 HIC2Q96JB3 615 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 ISCUQ9H1K1 167 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 SATB2Q9UPW6 733 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 RAI2Q9Y5P3 530 aa21.01■□□□□ 0.95
SMPD1-204ENST00000530395 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21■□□□□ 0.95
SMPD1-204ENST00000530395 RECQL5O94762 991 aaPredicted RBP21■□□□□ 0.95
SMPD1-204ENST00000530395 TNFP01375 233 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 KELP23276 732 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 HSPA9P38646 679 aaKnown RBP21■□□□□ 0.95
SMPD1-204ENST00000530395 KIAA1024LP59773 190 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 RALGDSQ12967 914 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 TCEA2Q15560 299 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 SMTNL2Q2TAL5 461 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 IGF2-ASQ6U949 168 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 TMCO3Q6UWJ1 677 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 BBS5Q8N3I7 341 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 KYQ8NBH2 561 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 SIRPGQ9P1W8 387 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 GPR34Q9UPC5 381 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 ENTPD2Q9Y5L3 495 aa21■□□□□ 0.95
SMPD1-204ENST00000530395 BZW2Q9Y6E2 419 aaKnown RBP21■□□□□ 0.95
SMPD1-204ENST00000530395 MGAQ8IWI9 3026 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 A0A1W2PQ67 120 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 NFKBIAP25963 317 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 UCNP55089 124 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 SLC10A7Q0GE19 358 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 PIGHQ14442 188 aaPredicted RBP20.99■□□□□ 0.95
SMPD1-204ENST00000530395 NR1I3Q14994 352 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 LIPIQ6XZB0 460 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 GPR155Q7Z3F1 870 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 OR6C4Q8NGE1 309 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 NSMCE1Q8WV22 266 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 KCNE4Q8WWG9 221 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 HSPH1Q92598 858 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 NAF1Q96HR8 494 aaKnown RBP20.99■□□□□ 0.95
SMPD1-204ENST00000530395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMPD1-204ENST00000530395 ASCL3Q9NQ33 180 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.99■□□□□ 0.95
SMPD1-204ENST00000530395 PCDHGA8Q9Y5G5 932 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 DGKBQ9Y6T7 804 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 KIF26BQ2KJY2 2108 aa20.99■□□□□ 0.95
SMPD1-204ENST00000530395 TEX51A0A1B0GUA7 166 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 TRAFD1O14545 582 aaPredicted RBP20.98■□□□□ 0.95
SMPD1-204ENST00000530395 SOCS5O75159 536 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 IL1R2P27930 398 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 SERPINB6P35237 376 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 CXADRP78310 365 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 IQCB1Q15051 598 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 ACOX1Q15067 660 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 ATPAF2Q8N5M1 289 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 PLA2G15Q8NCC3 412 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 OR56A4Q8NGH8 313 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 WDR36Q8NI36 951 aaKnown RBP20.98■□□□□ 0.95
SMPD1-204ENST00000530395 FUBP1Q96AE4 644 aaKnown RBP20.98■□□□□ 0.95
SMPD1-204ENST00000530395 PDXPQ96GD0 296 aa20.98■□□□□ 0.95
SMPD1-204ENST00000530395 RBM15Q96T37 977 aaKnown RBP eCLIP20.98■□□□□ 0.95
SMPD1-204ENST00000530395 A0A1W2PQJ5 194 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 HOXC4P09017 264 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-204ENST00000530395 AMPD1P23109 780 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 TMPRSS3P57727 454 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 POLNQ7Z5Q5 900 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 TP53INP2Q8IXH6 220 aa20.97■□□□□ 0.95
SMPD1-204ENST00000530395 ARL14Q8N4G2 192 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms