RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 CEP76Q8TAP6 659 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 CCDC110Q8TBZ0 833 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 PRCCQ92733 491 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 SEMA3CQ99985 751 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 HEPHQ9BQS7 1158 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 FRMD8P1Q9BZ68 369 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 EBF2Q9HAK2 575 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 USP29Q9HBJ7 922 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 ITM2CQ9NQX7 267 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 WSB2Q9NYS7 404 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 IL36AQ9UHA7 158 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 ATP8A1Q9Y2Q0 1164 aa11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
CCDC90B-210ENST00000528149 GOLGA6L10A0A0M3HER8 536 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 TRABD2BA6NFA1 517 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 FAM47DPA6NHR8 397 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ESPNB1AK53 854 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 KPNA3O00505 521 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ALOX15BO15296 676 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ZBTB24O43167 697 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 PHF2O75151 1096 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 LEFTY1O75610 366 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 IFNB1P01574 187 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 UGT2B4P06133 528 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ITIH2P19823 946 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 NFKB1P19838 968 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 CR2P20023 1033 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 CD6P30203 668 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 CD68P34810 354 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 PPP2CBP62714 309 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 PPP2CAP67775 309 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 NIPAL4Q0D2K0 466 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 CYP1B1Q16678 543 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 MYLK3Q32MK0 819 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 TEX44Q53QW1 395 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ARSIQ5FYB1 569 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 SPDYCQ5MJ68 293 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ALG1LQ6GMV1 187 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 TTC27Q6P3X3 843 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 TAB3Q8N5C8 712 aaPredicted RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 LSM14AQ8ND56 463 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 MAGOHBQ96A72 148 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 SPATA13Q96N96 652 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 NUDCD1Q96RS6 583 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 POLR1EQ9GZS1 481 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 NEUROG2Q9H2A3 272 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 PABPC3Q9H361 631 aaKnown RBP11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 FBRSQ9HAH7 460 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 NOD2Q9HC29 1040 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 IGSF5Q9NSI5 407 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 GGT7Q9UJ14 662 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 ZNF148Q9UQR1 794 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 TEX15Q9BXT5 2789 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 COL12A1Q99715 3063 aa11.65□□□□□ -0.54
CCDC90B-210ENST00000528149 CFAP69A5D8W1 941 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 C1QTNF3-AMACRE9PGA6 284 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 SPINT1O43278 529 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 RNASEH1O60930 286 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CBFA2T3O75081 653 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 RNASEH2AO75792 299 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 STK10O94804 968 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 POP4O95707 220 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 PRNPP04156 253 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ITGAVP06756 1048 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ETS1P14921 441 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 PSMB4P28070 264 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 SLC8A1P32418 973 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CD86P42081 329 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 PAFAH1B1P43034 410 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 TAS2R38P59533 333 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 AP1S1P61966 158 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 BNC1Q01954 994 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 SEMG2Q02383 582 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CFHR1Q03591 330 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 RAD51Q06609 339 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CNTN1Q12860 1018 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 SLC14A1Q13336 389 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CAMK2BQ13554 666 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 IHHQ14623 411 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ANKRD20A2Q5SQ80 823 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 FAXCQ5TGI0 409 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ANKRD20A1Q5TYW2 823 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ANKRD20A3Q5VUR7 823 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 DRICH1Q6PGQ1 229 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 NCEH1Q6PIU2 408 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 PCSK4Q6UW60 755 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 DSG4Q86SJ6 1040 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 GLRX5Q86SX6 157 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 CAMK1DQ8IU85 385 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 GLIS1Q8NBF1 620 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 KIF18AQ8NI77 898 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ARRDC2Q8TBH0 407 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 TEKT5Q96M29 485 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 FCRL3Q96P31 734 aaPredicted RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 FERMT1Q9BQL6 677 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 ORAI3Q9BRQ5 295 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 DDX47Q9H0S4 455 aaKnown RBP11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 GBA3Q9H227 469 aa11.64□□□□□ -0.55
CCDC90B-210ENST00000528149 GLOD4Q9HC38 313 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms