RNA–Protein interactions for RNA: ENST00000511214.1

SNF8-210, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-210ENST00000511214 PAPD5Q8NDF8 572 aaKnown RBP9.14□□□□□ -0.95
SNF8-210ENST00000511214 ZC3H15Q8WU90 426 aaKnown RBP9.14□□□□□ -0.95
SNF8-210ENST00000511214 PPWD1Q96BP3 646 aaKnown RBP9.14□□□□□ -0.95
SNF8-210ENST00000511214 ISOC1Q96CN7 298 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 MARK4Q96L34 752 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 OMDQ99983 421 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 MED10Q9BTT4 135 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 ADI1Q9BV57 179 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 TMEM106CQ9BVX2 250 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 EIF2AQ9BY44 585 aaKnown RBP9.14□□□□□ -0.95
SNF8-210ENST00000511214 SEMA6AQ9H2E6 1030 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 CCDC68Q9H2F9 335 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 GSTO2Q9H4Y5 243 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 WDCPQ9H6R7 721 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 NOL11Q9H8H0 719 aaKnown RBP9.14□□□□□ -0.95
SNF8-210ENST00000511214 POPDC3Q9HBV1 291 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 PDGFCQ9NRA1 345 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 TMPRSS4Q9NRS4 437 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 DDIT4Q9NX09 232 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 COX16Q9P0S2 106 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 OR12D3Q9UGF7 316 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 SH3GLB1Q9Y371 365 aa9.14□□□□□ -0.95
SNF8-210ENST00000511214 TRIP11Q15643 1979 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 MYOCOSA0A1B0GUC4 107 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 GRXCR2A6NFK2 248 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 YJEFN3A6XGL0 299 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TMEM233B4DJY2 109 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 H0YAE9 185 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 I6L893 689 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 SOCS2O14508 198 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 NRP1O14786 923 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 SLC7A4O43246 635 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 PEX10O60683 326 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 LRIG2O94898 1065 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 CSPG5O95196 566 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 NCAM1P13591 858 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 JUNBP17275 347 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 NDUFV1P49821 464 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 LILRA4P59901 499 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 C1QTNF8P60827 252 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 NRG1Q02297 640 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 CTBP1Q13363 440 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TMED1Q13445 227 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 ZNF792Q3KQV3 632 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 AASDHQ4L235 1098 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 TBCELQ5QJ74 424 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 ZNF470Q6ECI4 717 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 ESRP1Q6NXG1 681 aaKnown RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 ABRAXAS1Q6UWZ7 409 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 RANBP10Q6VN20 620 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 PRR23BQ6ZRT6 265 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TRIM74Q86UV6 250 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TRIM73Q86UV7 250 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 PTRH1Q86Y79 214 aaKnown RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 CLVS1Q8IUQ0 354 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 DENND6AQ8IWF6 608 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TBC1D21Q8IYX1 336 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 MIER2Q8N344 545 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 ATPAF2Q8N5M1 289 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 NETO2Q8NC67 525 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 FAM156AQ8NDB6 213 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TRPV3Q8NET8 790 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 CANT1Q8WVQ1 401 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 NDRG1Q92597 394 aaKnown RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 PEX13Q92968 403 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TMIGD2Q96BF3 282 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 C12orf43Q96C57 262 aaKnown RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 C19orf60Q96EN9 201 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 MYRFLQ96LU7 910 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 ZNF512Q96ME7 567 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 PGLYRP2Q96PD5 576 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 PPP1R16BQ96T49 567 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 CIB1Q99828 191 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 APOL2Q9BQE5 337 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 FICDQ9BVA6 458 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 NPLQ9BXD5 320 aaPredicted RBP9.13□□□□□ -0.95
SNF8-210ENST00000511214 TRIM54Q9BYV2 358 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 CXCL16Q9H2A7 254 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 CATSPERBQ9H7T0 1116 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 MAGEE1Q9HCI5 957 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 ANLNQ9NQW6 1124 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 GPRC5DQ9NZD1 345 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 CCDC167Q9P0B6 97 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 FZD1Q9UP38 647 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 SBF1O95248 1867 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 TANC1Q9C0D5 1861 aa9.13□□□□□ -0.95
SNF8-210ENST00000511214 IQCA1LA6NCM1 817 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 ZNF839A8K0R7 811 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 WASH4PA8MWX3 477 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 GOLGA8TH3BQL2 631 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 DLGAP1O14490 977 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 NOL3O60936 208 aaKnown RBP9.12□□□□□ -0.95
SNF8-210ENST00000511214 TIPRLO75663 272 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 BEST1O76090 585 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 BAIAP3O94812 1187 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 ESRRBO95718 433 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 CPNE6O95741 557 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 NPPAP01160 153 aa9.12□□□□□ -0.95
SNF8-210ENST00000511214 HNRNPCP07910 306 aaKnown RBP eCLIP9.12□□□□□ -0.95
SNF8-210ENST00000511214 HNRNPLP14866 589 aaKnown RBP eCLIP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms