RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 C21orf59P57076 290 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCNA1P78396 465 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 PLOD1Q02809 727 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 PRKCQQ04759 706 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CXCL9Q07325 125 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GALNT2Q10471 571 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GRSF1Q12849 480 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 MERTKQ12866 999 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 EPS8Q12929 822 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LAMC2Q13753 1193 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TTLL4Q14679 1199 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SOWAHAQ2M3V2 549 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SV2CQ496J9 727 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CCDC92Q53HC0 331 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 DCAF6Q58WW2 860 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 MTX3Q5HYI7 312 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 NHSL2Q5HYW2 709 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TBCELQ5QJ74 424 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 KIAA0930Q6ICG6 404 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LCN8Q6JVE9 175 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 NIPAL1Q6NVV3 410 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CES3Q6UWW8 571 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LBX2Q6XYB7 198 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GK5Q6ZS86 529 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LINC00299Q6ZSB3 139 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM43BQ6ZT52 329 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 NEK10Q6ZWH5 1172 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GALNT7Q86SF2 657 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 FAM131BQ86XD5 332 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 KLHDC8BQ8IXV7 354 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM192Q8IY95 271 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TBC1D21Q8IYX1 336 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 DEFB106AQ8N104 65 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 LSMEM2Q8N112 164 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 FSTL5Q8N475 847 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TTC30BQ8N4P2 665 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 DHRSXQ8N5I4 330 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 MINDY1Q8N5J2 469 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 RNF148Q8N7C7 305 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 C7orf31Q8N865 590 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 C12orf29Q8N999 325 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SHCBP1Q8NEM2 672 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZSCAN18Q8TBC5 510 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SPPL2BQ8TCT7 592 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 DQX1Q8TE96 717 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GIPC3Q8TF64 312 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 OSCP1Q8WVF1 389 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRUB1Q8WWH5 349 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 NT5C3BQ969T7 300 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 C12orf43Q96C57 262 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CENPNQ96H22 339 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ELMO2Q96JJ3 720 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SNX27Q96L92 541 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TEKT5Q96M29 485 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TSGA13Q96PP4 275 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SLC2A13Q96QE2 648 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 RANBP9Q96S59 729 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 NPY6RQ99463 290 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 AGAP2Q99490 1192 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CIB1Q99828 191 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 MRPL45Q9BRJ2 306 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ADI1Q9BV57 179 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM54Q9BYV2 358 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 SEMA6AQ9H2E6 1030 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 POMKQ9H5K3 350 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 NOL11Q9H8H0 719 aaKnown RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CAB39LQ9H9S4 337 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CXorf21Q9HAI6 301 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ENTPD7Q9NQZ7 604 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ATAD3AQ9NVI7 634 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ARHGEF38Q9NXL2 777 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GDAP2Q9NXN4 497 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 GIN1Q9NXP7 522 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ACTR3BQ9P1U1 418 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 XPR1Q9UBH6 696 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 CD300AQ9UGN4 299 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 BLOC1S6Q9UL45 172 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 MAGED2Q9UNF1 606 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 AKT3Q9Y243 479 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF711Q9Y462 761 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 HRH3Q9Y5N1 445 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 PARP14Q460N5 1801 aa4.99□□□□□ -1.61
HMGB3P16-201ENST00000508037 A0A087WZ62 844 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 E2F8A0AVK6 867 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PRORSD1PA6NEY8 169 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TMEM221A6NGB7 291 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TRIM64BA6NI03 449 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ASB14A6NK59 587 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 SAC3D1A6NKF1 404 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 POM121CA8CG34 1229 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 ZNF839A8K0R7 811 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 F5H423 210 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 STX16-NPEPL1H3BU86 382 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 M0QYT0 321 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 KCNK1O00180 336 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 KPNA4O00629 521 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 PHGDHO43175 533 aaKnown RBP4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 TSPAN1O60635 241 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 KATNA1O75449 491 aa4.98□□□□□ -1.61
HMGB3P16-201ENST00000508037 GMNNO75496 209 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms