RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 GUSBP11Q6P575 273 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 MACC1Q6ZN28 852 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 RFLNAQ6ZTI6 216 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 DPPA4Q7L190 304 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 LZTR1Q8N653 840 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 RFFLQ8WZ73 363 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 CRELD1Q96HD1 420 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 NUDCD1Q96RS6 583 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 UBL7Q96S82 380 aaPredicted RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 MGME1Q9BQP7 344 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 ATP13A3Q9H7F0 1226 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 ABHD10Q9NUJ1 306 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 CTTNBP2NLQ9P2B4 639 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 B4GALT6Q9UBX8 382 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 SEPT3Q9UH03 358 aa16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 APOBEC3BQ9UH17 382 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-215ENST00000506161 ACACAQ13085 2346 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 TLX3O43711 291 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 RECQL5O94762 991 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 PRB1P04280 392 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 JUPP14923 745 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 TSHRP16473 764 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 PTMSP20962 102 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 THOP1P52888 689 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 KRT81Q14533 505 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 GRM3Q14832 879 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 LRRC14Q15048 493 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 PAFAH1B3Q15102 231 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 CNGA3Q16281 694 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 CDKN3Q16667 212 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 SKOR2Q2VWA4 1001 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 ANKRD20A8PQ5CZ79 823 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 CRTC1Q6UUV9 634 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 ATPAF2Q8N5M1 289 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 OR8K1Q8NGG5 319 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 PTCD2Q8WV60 388 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 RAPGEF5Q92565 580 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 PDXPQ96GD0 296 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 ZNF599Q96NL3 588 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 APOOQ9BUR5 198 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 LGR4Q9BXB1 951 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 MRPL40Q9NQ50 206 aaKnown RBP16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 DONSONQ9NYP3 566 aa16.81■□□□□ 0.28
PDLIM7-215ENST00000506161 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 SSU72P8A0A1W2PR75 194 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 TMEM202A6NGA9 273 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 PDHA1P08559 390 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 TGM2P21980 687 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 SUOXP51687 545 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 AP1S1P61966 158 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 YPEL5P62699 121 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 GBE1Q04446 702 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 GALNT2Q10471 571 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 TBX2Q13207 712 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 ZNF235Q14590 738 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 PRRT3Q5FWE3 981 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 CDCP2Q5VXM1 449 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 TSPAN33Q86UF1 283 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 SLC35F3Q8IY50 421 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 TEX26Q8N6G2 289 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 PDCD7Q8N8D1 485 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 FAM181AQ8N9Y4 354 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 FAF2Q96CS3 445 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 NT5MQ9NPB1 228 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 TFR2Q9UP52 801 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 HYOU1Q9Y4L1 999 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 CSNK1G3Q9Y6M4 447 aa16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 URB1O60287 2271 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-215ENST00000506161 A0A087WV48 116 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 A0A1W2PNU3 283 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 PMS2P1A4D2B8 440 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 NPIPB15A6NHN6 443 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 C3orf70A6NLC5 250 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 TK2O00142 265 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 YY2O15391 372 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 LZTS3O60299 673 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 OPA1O60313 960 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 MT-CO3P00414 261 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 FUCA1P04066 466 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 ALPIP09923 528 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 H2AFZP0C0S5 128 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 TMEM253P0C7T8 217 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 CTPS1P17812 591 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 GARSP41250 739 aaKnown RBP16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 MMP13P45452 471 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 DSC2Q02487 901 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 ILKQ13418 452 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 MESDQ14696 234 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 NFATC4Q14934 902 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 CFAP58Q5T655 872 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 FAXCQ5TGI0 409 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 ERAP2Q6P179 960 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 ENPP7Q6UWV6 458 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 H2AFVQ71UI9 128 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 HSD11B1LQ7Z5J1 315 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 HID1Q8IV36 788 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 CBARPQ8N350 705 aaPredicted RBP16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 DCBLD1Q8N8Z6 715 aa16.79■□□□□ 0.28
PDLIM7-215ENST00000506161 SLC35G2Q8TBE7 412 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms