RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ALFQ53S48 1182 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 IL27RAQ6UWB1 636 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 CDYL2Q8N8U2 506 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 LINGO1Q96FE5 620 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 OPTCQ9UBM4 332 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 KLQ9UEF7 1012 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 ZBTB14O43829 449 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 GJB5O95377 273 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 COL6A1P12109 1028 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 PTPN2P17706 415 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 GPX6P59796 221 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 SLC10A2Q12908 348 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 PPP1R15BQ5SWA1 713 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 HECTD2Q5U5R9 776 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 IGDCC3Q8IVU1 814 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 ZNF366Q8N895 744 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 COPS8Q99627 209 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 MRPL57Q9BQC6 102 aaKnown RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 OXCT2Q9BYC2 517 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 FAM126AQ9BYI3 521 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 FGF18O76093 207 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 HAPLN1P10915 354 aaPredicted RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 SKIV2L2P42285 1042 aaKnown RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 PKNOX1P55347 436 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 SLC25A3Q00325 362 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 TCEAL1Q15170 157 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 ATP6AP1LQ52LC2 224 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 SNX30Q5VWJ9 437 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 CAMK1DQ8IU85 385 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 NKAPQ8N5F7 415 aaKnown RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 PCDH20Q8N6Y1 951 aaKnown RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 KYQ8NBH2 561 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 C2orf15Q8WU43 125 aaKnown RBP14.15□□□□□ -0.14
TCOF1-207ENST00000504761 CD84Q9UIB8 345 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 SOX13Q9UN79 622 aa14.15□□□□□ -0.14
TCOF1-207ENST00000504761 MYO18AQ92614 2054 aaKnown RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 SEC22BO75396 215 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 HOXB8P17481 243 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 DGKAP23743 735 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 RAP1GDS1P52306 607 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 TAS2R39P59534 338 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 MS4A13Q5J8X5 152 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 TPGS2Q68CL5 300 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 TMPRSS6Q8IU80 811 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 OR13C4Q8NGS5 318 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 RBBP8Q99708 897 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 SEZ6LQ9BYH1 1024 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CLIC5Q9NZA1 410 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 ZNF212Q9UDV6 495 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 ARL5AQ9Y689 179 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 EVPLLA8MZ36 301 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 IFRD1O00458 451 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 RPP40O75818 363 aaKnown RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 KRT6AP02538 564 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 KRT6BP04259 564 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CYP2A7P20853 494 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 HTR7P34969 479 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 KRT6CP48668 564 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 LIMK2P53671 638 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CLLU1OSQ5K130 101 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 ACBD5Q5T8D3 534 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CHST9Q7L1S5 443 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 BTBD10Q9BSF8 475 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CCDC90BQ9GZT6 254 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 DOCK2Q92608 1830 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 MYO1GB0I1T2 1018 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 HAS3O00219 553 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 SLC25A14O95258 325 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CSKP41240 450 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 GPR1P46091 355 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 POLE2P56282 527 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 ESRRGP62508 458 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 ABRQ12979 859 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 KCNJ11Q14654 390 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 TSTD2Q5T7W7 516 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CMTM8Q8IZV2 173 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 ZNF557Q8N988 423 aaPredicted RBP14.14□□□□□ -0.15
TCOF1-207ENST00000504761 VPS37AQ8NEZ2 397 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 YIPF2Q9BWQ6 316 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 FKBPLQ9UIM3 349 aa14.14□□□□□ -0.15
TCOF1-207ENST00000504761 CPSF4O95639 269 aaKnown RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 WDR4P57081 412 aaKnown RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 RIPOR1Q6ZS17 1223 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 ZNF398Q8TD17 642 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 FAM162AQ96A26 154 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 CDRT15Q96T59 188 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 VTI1BQ9UEU0 232 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 CIDEBQ9UHD4 219 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 COL5A3P25940 1745 aaPredicted RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 MPSTP25325 297 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 CRHR1P34998 444 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 VWA5B1Q5TIE3 1220 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 LIPMQ5VYY2 423 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 PIWIL4Q7Z3Z4 852 aaKnown RBP14.13□□□□□ -0.15
TCOF1-207ENST00000504761 ESAMQ96AP7 390 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 GPR21Q99679 349 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 MRGBPQ9NV56 204 aa14.13□□□□□ -0.15
TCOF1-207ENST00000504761 COPG2Q9UBF2 871 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms