RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 RAD1O60671 282 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 KRT7P08729 469 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 LIG3P49916 1009 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 GEMIN4P57678 1058 aaKnown RBP9.18□□□□□ -0.94
CCDC171-209ENST00000498725 ELP6Q0PNE2 266 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM52BQ4KMG9 183 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 SNAP47Q5SQN1 464 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 CFAP58Q5T655 872 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 ATP1A1-AS1Q5TC04 95 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 FAM72AQ5TYM5 149 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TAF3Q5VWG9 929 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 FAM72DQ6L9T8 149 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TRNP1Q6NT89 227 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TRIM65Q6PJ69 517 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 OGFOD3Q6PK18 319 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 ENOSF1Q7L5Y1 443 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 SLC47A2Q86VL8 602 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 ATCAYQ86WG3 371 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 FAM72BQ86X60 149 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 PLPP6Q8IY26 295 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 FMR1NBQ8N0W7 255 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-209ENST00000498725 EMC1Q8N766 993 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 OR56A4Q8NGH8 313 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 PATE1Q8WXA2 126 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 SNX21Q969T3 373 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 FUBP1Q96AE4 644 aaKnown RBP9.18□□□□□ -0.94
CCDC171-209ENST00000498725 HMCESQ96FZ2 354 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 HAPLN3Q96S86 360 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 CTRCQ99895 268 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TTYH3Q9C0H2 523 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 KLC2Q9H0B6 622 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 GPN2Q9H9Y4 310 aaPredicted RBP9.18□□□□□ -0.94
CCDC171-209ENST00000498725 PCDH12Q9NPG4 1184 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 SPATS2LQ9NUQ6 558 aaKnown RBP9.18□□□□□ -0.94
CCDC171-209ENST00000498725 OCIAD1Q9NX40 245 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 KCNK4Q9NYG8 393 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 OR12D3Q9UGF7 316 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 TUBD1Q9UJT1 453 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 MAN1B1Q9UKM7 699 aa9.18□□□□□ -0.94
CCDC171-209ENST00000498725 LOC101059948A0A1B0GTJ6 334 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 A1L4Q6 167 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 PRR19A6NJB7 356 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 EFCAB7A8K855 629 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 A8MU76 341 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 CACNB4O00305 520 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 NUDT21O43809 227 aaKnown RBP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 RAMP2O60895 175 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 AGFG2O95081 481 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 PNLIPP16233 465 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 CSTF2P33240 577 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 CLCN1P35523 988 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 ETFBP38117 255 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 UQCRFS1P47985 274 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 CDC20Q12834 499 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 MTM1Q13496 603 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 C15orf59Q2T9L4 293 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 LACTB2Q53H82 288 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 ANKS6Q68DC2 871 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 KDELC2Q7Z4H8 507 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 XYLT1Q86Y38 959 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 KIAA1524Q8TCG1 905 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 GPBAR1Q8TDU6 330 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 ZDHHC1Q8WTX9 485 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 SHC3Q92529 594 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 NT5C3BQ969T7 300 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 MIB2Q96AX9 1013 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 C18orf8Q96DM3 657 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 PGAP3Q96FM1 320 aaPredicted RBP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 CATSPER2Q96P56 530 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 MAGEH1Q9H213 219 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 METTL5Q9NRN9 209 aaKnown RBP9.17□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM9Q9P0T7 183 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 TP53TG5Q9Y2B4 290 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 RELNP78509 3460 aa9.17□□□□□ -0.94
CCDC171-209ENST00000498725 TRBV23OR9-2A0A075B6M9 112 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 BICDL2A1A5D9 508 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 GOLGA6L4A6NEF3 574 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 K7EM74 188 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 FOXN3O00409 490 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 KDELR3O43731 214 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 ECEL1O95672 775 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 RHOQP17081 205 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 AK4P27144 223 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 CD1CP29017 333 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 OAS2P29728 719 aaKnown RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 MAPKAPK2P49137 400 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 UGP2Q16851 508 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 ERAP2Q6P179 960 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 SLC30A9Q6PML9 568 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 GBP6Q6ZN66 633 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 NLRP14Q86W24 1093 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 ZNF761Q86XN6 746 aaPredicted RBP9.16□□□□□ -0.94
CCDC171-209ENST00000498725 ZDHHC17Q8IUH5 632 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 PELI3Q8N2H9 469 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 TMEM35BQ8NCS4 154 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 AGBL5Q8NDL9 886 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 CCDC112Q8NEF3 446 aa9.16□□□□□ -0.94
CCDC171-209ENST00000498725 APOBEC4Q8WW27 367 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms